_version_ 1866910366356733952
author Schmied, Christopher
Nelson, Michael
Avilov, Sergiy
Bakker, Gert-Jan
Bertocchi, Cristina
Bischof, Johanna
Boehm, Ulrike
Brocher, Jan
Carvalho, Mariana
Chiritescu, Catalin
Christopher, Jana
Cimini, Beth
Conde-Sousa, Eduardo
Ebner, Michael
Ecker, Rupert
Eliceiri, Kevin
Fernandez-Rodriguez, Julia
Gaudreault, Nathalie
Gelman, Laurent
Grunwald, David
Gu, Tingting
Halidi, Nadia
Hammer, Mathias
Hartley, Matthew
Held, Marie
Jug, Florian
Kapoor, Varun
Koksoy, Ayse Aslihan
Lacoste, Judith
Dévédec, Sylvia Le
Guyader, Sylvie Le
Liu, Penghuan
Martins, Gabriel
Mathur, Aastha
Miura, Kota
Llopis, Paula Montero
Nitschke, Roland
North, Alison
Parslow, Adam
Payne-Dwyer, Alex
Plantard, Laure
Rizwan, Ali
Schroth-Diez, Britta
Schütz, Lucas
Scott, Ryan T.
Seitz, Arne
Selchow, Olaf
Sharma, Ved
Spitaler, Martin
Srinivasan, Sathya
De Castillia, Caterina Strambio
Taatjes, Douglas
Tischer, Christian
Jambor, Helena Klara
author_facet Schmied, Christopher
Nelson, Michael
Avilov, Sergiy
Bakker, Gert-Jan
Bertocchi, Cristina
Bischof, Johanna
Boehm, Ulrike
Brocher, Jan
Carvalho, Mariana
Chiritescu, Catalin
Christopher, Jana
Cimini, Beth
Conde-Sousa, Eduardo
Ebner, Michael
Ecker, Rupert
Eliceiri, Kevin
Fernandez-Rodriguez, Julia
Gaudreault, Nathalie
Gelman, Laurent
Grunwald, David
Gu, Tingting
Halidi, Nadia
Hammer, Mathias
Hartley, Matthew
Held, Marie
Jug, Florian
Kapoor, Varun
Koksoy, Ayse Aslihan
Lacoste, Judith
Dévédec, Sylvia Le
Guyader, Sylvie Le
Liu, Penghuan
Martins, Gabriel
Mathur, Aastha
Miura, Kota
Llopis, Paula Montero
Nitschke, Roland
North, Alison
Parslow, Adam
Payne-Dwyer, Alex
Plantard, Laure
Rizwan, Ali
Schroth-Diez, Britta
Schütz, Lucas
Scott, Ryan T.
Seitz, Arne
Selchow, Olaf
Sharma, Ved
Spitaler, Martin
Srinivasan, Sathya
De Castillia, Caterina Strambio
Taatjes, Douglas
Tischer, Christian
Jambor, Helena Klara
contents Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. However for scientists wishing to publish the obtained images and image analyses results, there are to date no unified guidelines. Consequently, microscopy images and image data in publications may be unclear or difficult to interpret. Here we present community-developed checklists for preparing light microscopy images and image analysis for publications. These checklists offer authors, readers, and publishers key recommendations for image formatting and annotation, color selection, data availability, and for reporting image analysis workflows. The goal of our guidelines is to increase the clarity and reproducibility of image figures and thereby heighten the quality of microscopy data is in publications.
format Preprint
id arxiv_https___arxiv_org_abs_2302_07005
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Community-developed checklists for publishing images and image analysis
Schmied, Christopher
Nelson, Michael
Avilov, Sergiy
Bakker, Gert-Jan
Bertocchi, Cristina
Bischof, Johanna
Boehm, Ulrike
Brocher, Jan
Carvalho, Mariana
Chiritescu, Catalin
Christopher, Jana
Cimini, Beth
Conde-Sousa, Eduardo
Ebner, Michael
Ecker, Rupert
Eliceiri, Kevin
Fernandez-Rodriguez, Julia
Gaudreault, Nathalie
Gelman, Laurent
Grunwald, David
Gu, Tingting
Halidi, Nadia
Hammer, Mathias
Hartley, Matthew
Held, Marie
Jug, Florian
Kapoor, Varun
Koksoy, Ayse Aslihan
Lacoste, Judith
Dévédec, Sylvia Le
Guyader, Sylvie Le
Liu, Penghuan
Martins, Gabriel
Mathur, Aastha
Miura, Kota
Llopis, Paula Montero
Nitschke, Roland
North, Alison
Parslow, Adam
Payne-Dwyer, Alex
Plantard, Laure
Rizwan, Ali
Schroth-Diez, Britta
Schütz, Lucas
Scott, Ryan T.
Seitz, Arne
Selchow, Olaf
Sharma, Ved
Spitaler, Martin
Srinivasan, Sathya
De Castillia, Caterina Strambio
Taatjes, Douglas
Tischer, Christian
Jambor, Helena Klara
Other Quantitative Biology
Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. However for scientists wishing to publish the obtained images and image analyses results, there are to date no unified guidelines. Consequently, microscopy images and image data in publications may be unclear or difficult to interpret. Here we present community-developed checklists for preparing light microscopy images and image analysis for publications. These checklists offer authors, readers, and publishers key recommendations for image formatting and annotation, color selection, data availability, and for reporting image analysis workflows. The goal of our guidelines is to increase the clarity and reproducibility of image figures and thereby heighten the quality of microscopy data is in publications.
title Community-developed checklists for publishing images and image analysis
topic Other Quantitative Biology
url https://arxiv.org/abs/2302.07005