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Main Authors: Liu, Chuang, Yao, Zelin, Ma, Xueqi, Wang, Luzhi, Chen, Mukun, Xu, Pinghua, Hu, Wenbin
Format: Preprint
Published: 2026
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Online Access:https://arxiv.org/abs/2605.01310
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author Liu, Chuang
Yao, Zelin
Ma, Xueqi
Wang, Luzhi
Chen, Mukun
Xu, Pinghua
Hu, Wenbin
author_facet Liu, Chuang
Yao, Zelin
Ma, Xueqi
Wang, Luzhi
Chen, Mukun
Xu, Pinghua
Hu, Wenbin
contents Graph self-supervised learning typically relies on large-scale unlabeled datasets, heavily inflating computational costs. However, empirical evidence suggests that these datasets contain substantial redundancy-our analysis reveals that uniformly subsampling 50% of graphs retains over 96% of downstream performance. To exploit this redundancy, we introduce GraphSculptor for pre-training coreset construction. Unlike methods dependent on additional training-time signals or limited solely to topological statistics, GraphSculptor provides a label-free solution that constructs coresets via two complementary perspectives: intrinsic structure and contextual semantics. Concretely, structural diversity is quantified using intrinsic graph statistics, yielding a structural feature vector for each graph, while semantic diversity is captured by utilizing a pre-trained language model to encode descriptions generated via graph-to-text. GraphSculptor integrates these signals into a unified metric space and performs cluster-aware selection to preserve joint structural-semantic diversity. We further derive a theoretical bound on the loss gap between coreset and full-data pre-training, offering theoretical motivation for our selection formulation. Extensive experiments demonstrate that GraphSculptor effectively sculpts the dataset: a 10% coreset achieves 99.6% of full-data performance while reducing pre-training time by nearly 90%, offering a scalable solution for data-efficient graph pre-training.
format Preprint
id arxiv_https___arxiv_org_abs_2605_01310
institution arXiv
publishDate 2026
record_format arxiv
spellingShingle GraphSculptor: Sculpting Pre-training Coreset for Graph Self-supervised Learning
Liu, Chuang
Yao, Zelin
Ma, Xueqi
Wang, Luzhi
Chen, Mukun
Xu, Pinghua
Hu, Wenbin
Machine Learning
Artificial Intelligence
Graph self-supervised learning typically relies on large-scale unlabeled datasets, heavily inflating computational costs. However, empirical evidence suggests that these datasets contain substantial redundancy-our analysis reveals that uniformly subsampling 50% of graphs retains over 96% of downstream performance. To exploit this redundancy, we introduce GraphSculptor for pre-training coreset construction. Unlike methods dependent on additional training-time signals or limited solely to topological statistics, GraphSculptor provides a label-free solution that constructs coresets via two complementary perspectives: intrinsic structure and contextual semantics. Concretely, structural diversity is quantified using intrinsic graph statistics, yielding a structural feature vector for each graph, while semantic diversity is captured by utilizing a pre-trained language model to encode descriptions generated via graph-to-text. GraphSculptor integrates these signals into a unified metric space and performs cluster-aware selection to preserve joint structural-semantic diversity. We further derive a theoretical bound on the loss gap between coreset and full-data pre-training, offering theoretical motivation for our selection formulation. Extensive experiments demonstrate that GraphSculptor effectively sculpts the dataset: a 10% coreset achieves 99.6% of full-data performance while reducing pre-training time by nearly 90%, offering a scalable solution for data-efficient graph pre-training.
title GraphSculptor: Sculpting Pre-training Coreset for Graph Self-supervised Learning
topic Machine Learning
Artificial Intelligence
url https://arxiv.org/abs/2605.01310