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| Format: | Recurso digital |
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Zenodo
2025
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| Online Access: | https://doi.org/10.5281/zenodo.14920975 |
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Table of Contents:
- [](https://shields.io/)   # Long read pipelines This repository contains pipelines for processing of long read data from PacBio and/or Oxford Nanopore platforms. The pipelines are written in [WDL 1.0](https://github.com/openwdl/wdl/blob/main/versions/1.0/SPEC.md#introduction) intended for use with Google Cloud Platform via the scientific workflow engine, [Cromwell](https://github.com/broadinstitute/cromwell). Processing is designed to be reasonably consistent between both long read platforms, and use platform-specific options or tasks where necessary. High level workflows can be found in the wdl/ directory.