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| Main Authors: | , |
|---|---|
| Format: | Recurso digital |
| Sprog: | engelsk |
| Udgivet: |
Zenodo
2024
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| Fag: | |
| Online adgang: | https://doi.org/10.5281/zenodo.15203103 |
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Indholdsfortegnelse:
- <p>Supplementary Figures, Tables, and Material and Methods for the main article “Factors influencing the accuracy and precision in dating single gene trees” (<a href="https://doi.org/10.1101/2020.08.24.264671">https://doi.org/10.1101/2020.08.24.264671v7</a>)</p> <h3>Table of contents</h3> <ol> <li>21 species Primate tree with median branch lengths (Figure).</li> <li>Complete list of the 56 input features for the regression (Table).</li> <li>Alternative regression to the one in the main text (Figure, Result).</li> <li>Enriched human gene annotations from the set with lowest predicted dispersion (Figure, Result).</li> <li>Enriched human gene annotations from the set of genes with longest alignment (Figure, Result).</li> <li>Observed distributions of the simulated parameters in the Primates gene trees (Figure)</li> <li>Sampling from the prior of the Beast model (Figure).</li> <li>Species and gene trees preprocessing (Methods).</li> <li>Program versions (Methods).</li> <li>Beast clock model parameters VS rate summary statistics (Figure).</li> <li>Feature transformations (Table, Methods).</li> <li>Aberrant gene trees (35), removed prior to the regression (Table, Methods).</li> <li>Detailed outputs and parameters of the regression of per-tree error (Table).</li> <li>Observed distribution of Kappa (transitions/transversions) in the Primates gene trees (Figure)</li> <li>Number of trees having one or more variable with ESS<200 (Table).</li> </ol> <p> </p>