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| Auteurs principaux: | , , |
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| Format: | Recurso digital |
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| Publié: |
Zenodo
2025
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| Accès en ligne: | https://doi.org/10.5281/zenodo.17177276 |
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Table des matières:
- <h2>What's Changed</h2> <ul> <li>Modify GitHub Release step to check for existence by @akhanf in https://github.com/khanlab/zarrnii/pull/31</li> <li>Update copilot instructions for Poetry → uv migration by @Copilot in https://github.com/khanlab/zarrnii/pull/33</li> <li>Refactor ZarrNii to use NgffImage internally with format-specific data ordering, smart spatial dimension handling, and complete functionality restoration including orientation support by @Copilot in https://github.com/khanlab/zarrnii/pull/32</li> <li>Implement code coverage checks and add comprehensive tests to achieve 84% coverage by @Copilot in https://github.com/khanlab/zarrnii/pull/34</li> <li>Update documentation for modern uv workflow and preferred API methods by @Copilot in https://github.com/khanlab/zarrnii/pull/35</li> <li>Add support for 5D images with time dimension (T,C,Z,Y,X) by @Copilot in https://github.com/khanlab/zarrnii/pull/36</li> <li>Add downsample_near_isotropic parameter to from_ome_zarr for automatic anisotropy correction by @Copilot in https://github.com/khanlab/zarrnii/pull/37</li> <li>Add ZipStore support for OME-Zarr files (.ome.zarr.zip) by @Copilot in https://github.com/khanlab/zarrnii/pull/43</li> <li>Add plugin architecture for segmentation with initial Otsu implementation by @Copilot in https://github.com/khanlab/zarrnii/pull/41</li> <li>Harmonize linting and code quality checks across Copilot and CI to prevent formatting conflicts by @Copilot in https://github.com/khanlab/zarrnii/pull/45</li> <li>Clean up extraneous files from early development by @Copilot in https://github.com/khanlab/zarrnii/pull/51</li> <li>Ensure consistent code documentation: docstrings and type hints by @Copilot in https://github.com/khanlab/zarrnii/pull/52</li> <li>Add comprehensive Imaris (.ims) file format support with fixed HDF5 compatibility implementation by @Copilot in https://github.com/khanlab/zarrnii/pull/39</li> <li>chore: update dependencies by @github-actions[bot] in https://github.com/khanlab/zarrnii/pull/30</li> </ul> <h2>New Contributors</h2> <ul> <li>@github-actions[bot] made their first contribution in https://github.com/khanlab/zarrnii/pull/30</li> </ul> <p><strong>Full Changelog</strong>: https://github.com/khanlab/zarrnii/compare/v0.4.0-alpha1...v0.5.0-alpha1</p>