:: Library Catalog

Azala

Gorde:

Xehetasun bibliografikoak
Egile Nagusiak:	Shukla, Navya, Gallego Romero, Irene
Formatua:	Recurso digital
Hizkuntza:
Argitaratua:	Zenodo 2026
Gaiak:	Genomics/methods
Sarrera elektronikoa:	https://doi.org/10.5281/zenodo.19568005
Etiketak:	Etiketa erantsi Etiketarik gabe, Izan zaitez lehena erregistro honi etiketa jartzen!

Antzeko izenburuak

Supplementary information for "Factors influencing the accuracy and precision in dating single gene trees"
nork: Louvel, Guillaume, et al.
Argitaratua: (2024)

plit-genome v1.3
nork: Papadopoulos, Nikolaos
Argitaratua: (2025)

AirLift: A Fast and Comprehensive Technique for Remapping Alignments between Reference Genomes
nork: Kim, Jeremie S., et al.
Argitaratua: (2019)

HEK-Omics: The promise of omics to optimize HEK293 for recombinant adeno-associated virus (rAAV) gene therapy manufacturing
nork: Gurazada, Sai Guna Ranjan, et al.
Argitaratua: (2024)

Upcycling Human Excrement: The Gut Microbiome to Soil Microbiome Axis
nork: Meilander, Jeff, et al.
Argitaratua: (2024)

GVAtlas: Pioneering Genomic Variant Analysis and Visualization for SARS CoV 2 and Beyond
nork: Tahir, Bhatti, et al.
Argitaratua: (2025)

Sweetwater: An interpretable and adaptive autoencoder for efficient tissue deconvolution
nork: de la Fuente, Jesus, et al.
Argitaratua: (2023)

GPU-accelerated single-cell analysis at scale with rapids-singlecell
nork: Dicks, Severin, et al.
Argitaratua: (2026)

Cross-Species Antimicrobial Resistance Prediction from Genomic Foundation Models
nork: Tai, Huilin
Argitaratua: (2026)

Omics Data Discovery Agents
nork: Hutton, Alexandre, et al.
Argitaratua: (2026)

RareCollab: an LLM-powered framework for multimodal reasoning in Mendelian disease diagnosis
nork: Qi, Guantong, et al.
Argitaratua: (2026)

The Mechanistic Invariance Test: Genomic Language Models Fail to Learn Positional Regulatory Logic
nork: Cheng, Bryan, et al.
Argitaratua: (2026)

ClusterChirp: Scalable Interactive Exploration of Omics Data with Natural Language-Guided Analysis
nork: Rawal, Osho, et al.
Argitaratua: (2026)

Graph-Based Multi-Omics Integration Improves Subtype Recovery and Survival Prediction Over Classical Integration Strategies in TCGA-BRCA
nork: Ahmad, Taha
Argitaratua: (2026)

Y-Trim: Evidence-gated Adaptase tail trimming for single-stranded bisulfite sequencing
nork: Fang, Yihan
Argitaratua: (2026)

Identifying genes associated with phenotypes using machine and deep learning
nork: Muneeb, Muhammad, et al.
Argitaratua: (2026)

Population-Specific Genetic and Non-Genetic Influences on Sleep Traits and Health Outcomes
nork: Park, Jiheum, et al.
Argitaratua: (2026)

C3P: Contrastive promoter-protein pretraining yields representations capturing bacterial gene regulation
nork: Dufault, Cameron, et al.
Argitaratua: (2026)

Large Language Models for Variant-Centric Functional Evidence Mining
nork: Saadat, Ali, et al.
Argitaratua: (2026)

ECLIPSE: A Composable Pipeline for Predicting ecDNA Formation, Evolution, and Therapeutic Vulnerabilities in Cancer
nork: Cheng, Bryan, et al.
Argitaratua: (2026)

Alteration of the Brains Microbiome and Neuroinflammation Associated with Ventricular Catheters
nork: Zhu, Zihan, et al.
Argitaratua: (2026)

SeekRBP: Leveraging Sequence-Structure Integration with Reinforcement Learning for Receptor-Binding Protein Identification
nork: Luo, Xiling, et al.
Argitaratua: (2026)

The Cathaya argyrophylla Genome Reveals the Evolutionary Trade-offs of a Living Fossil
nork: Wang, Yun, et al.
Argitaratua: (2026)

oxo-call: Documentation-grounded Skill Augmentation for Accurate Bioinformatics Command-line Generation with Large Language Models
nork: Peng, Yun, et al.
Argitaratua: (2026)

BEDCrypt: Privacy-preserving interval analytics with homomorphic encryption
nork: Provatas, Kimon Antonios, et al.
Argitaratua: (2026)

GP-DHT: A Dual-Head Transformer with Contras-tive Learning for Predicting Gene Regulatory Rela-tionships across Species from Single-Cell Data
nork: Yan, Shuai, et al.
Argitaratua: (2026)

PhageMind: Generalized Strain-level Phage Host Range Prediction via Meta-learning
nork: Shen, Yang, et al.
Argitaratua: (2026)

Histopathology-centered Computational Evolution of Spatial Omics: Integration, Mapping, and Foundation Models
nork: Hao, Ninghui, et al.
Argitaratua: (2026)

Probing 3D Chromatin Structure Awareness in Evo2 DNA Language Model
nork: Lee, UkJin
Argitaratua: (2026)

TPMM: Three-component Posterior Mixture Model Enables Robust Inverton Detection in Low-Depth Metagenomes and Suggests Potential Viral Invertons
nork: Lu, Yi, et al.
Argitaratua: (2026)

Poisoning the Genome: Targeted Backdoor Attacks on DNA Foundation Models
nork: Koilakos, Charalampos, et al.
Argitaratua: (2026)

Supregraph: Enabling Information-Optimal Assembly Graph Representation of a Read Set
nork: Bankevich, Anton
Argitaratua: (2026)

Imaging Exploration of Molecular Subtypes in Tongue Squamous Cell Carcinoma
nork: Pan, Hao, et al.
Argitaratua: (2026)

Robust Clustering Analysis of Genes Related to Age-related Macular Degeneration using RNA-Seq
nork: Gutierrez, Brayan, et al.
Argitaratua: (2026)

Conditional Monte Carlo Tree Diffusion for Designing Cell-Type-Specific and Biologically Faithful Regulatory DNA
nork: Awasthi, Animesh, et al.
Argitaratua: (2026)

Classification of SARS-CoV-2 Variants through The Epistatical Circos Plots with Convolutional Neural Networks
nork: Jing, Bo, et al.
Argitaratua: (2026)

Toward Interpretable and Generalizable AI in Regulatory Genomics
nork: Nagai, Masayuki, et al.
Argitaratua: (2026)

Biological Sequence Clustering: A Survey
nork: Zhang, Simeng, et al.
Argitaratua: (2026)

FUNGAR: a pipeline for detecting antifungal resistance mutations directly from metagenomic short reads
nork: Antoniolli, Henrique RM, et al.
Argitaratua: (2026)

PhenotypeToGeneDownloaderR: automated multi-source retrieval and validation of phenotype-associated genes
nork: Muneeb, Muhammad, et al.
Argitaratua: (2026)