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| Format: | Recurso digital |
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Zenodo
2026
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| Online Access: | https://doi.org/10.5281/zenodo.20122871 |
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Table of Contents:
- <h2>PFM-MEFMRI v0.1.0</h2> <p>Initial archival release of <strong>PFM-MEFMRI</strong>, an updated and reorganized replacement for the earlier <strong>Liston Laboratory MultiEcho fMRI Pipeline</strong> repository:</p> <p>https://github.com/cjl2007/Liston-Laboratory-MultiEchofMRI-Pipeline</p> <p>PFM-MEFMRI provides a modular, configuration-driven multi-echo fMRI preprocessing and denoising pipeline for precision functional mapping and individual-level functional connectivity analysis. This release modernizes the earlier pipeline structure, improves portability, and organizes the workflow around clearer configuration files, subject-directory conventions, provenance tracking, and quality-assurance outputs.</p> <p>This release includes:</p> <ul> <li>Core pipeline entry points for running multi-echo fMRI preprocessing workflows</li> <li>Configuration templates for study- and machine-specific settings</li> <li>Import utilities for raw scanner exports and BIDS-formatted datasets</li> <li>Support for subject-directory layouts used in precision functional mapping workflows</li> <li>Provenance and quality-assurance output organization</li> <li>Optional integration with <code>pfm-nsi</code> for NSI-based quality assessment</li> <li>Documentation of major external software dependencies</li> </ul> <p>This release should be treated as the maintained version of the multi-echo fMRI preprocessing workflow previously distributed through <code>Liston-Laboratory-MultiEchofMRI-Pipeline</code>.</p> <h2>Citation</h2> <p>Lynch CJ, Power JD, Scult MA, Dubin M, Gunning FM, Liston C. Rapid Precision Functional Mapping of Individuals Using Multi-Echo fMRI. <em>Cell Reports</em>. 2020;33(12):108540. doi:10.1016/j.celrep.2020.108540</p>