Phylogenetic tree reconstruction from genome-scale metabolic models
Fuente:
arXiv
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| Autori principali: | , , , , |
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| Natura: | Preprint |
| Pubblicazione: |
2012
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| Soggetti: | |
| Accesso online: | |
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| _version_ | 1866917249475936256 |
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| author | Gamermann, D. Montagud, A. Conejero, J. A. de Córdoba, P. F. Urchieguía, J. F. |
| author_facet | Gamermann, D. Montagud, A. Conejero, J. A. de Córdoba, P. F. Urchieguía, J. F. |
| contents | A wide range of applications and research has been done with genome-scale metabolic models. In this work we describe a methodology for comparing metabolic networks constructed from genome-scale metabolic models and how to apply this comparison in order to infer evolutionary distances between different organisms. Our methodology allows a quantification of the metabolic differences between different species from a broad range of families and even kingdoms. This quantification is then applied in order to reconstruct phylogenetic trees for sets of various organisms. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_1211_7192 |
| institution | arXiv |
| publishDate | 2012 |
| record_format | arxiv |
| spellingShingle | Phylogenetic tree reconstruction from genome-scale metabolic models Gamermann, D. Montagud, A. Conejero, J. A. de Córdoba, P. F. Urchieguía, J. F. Molecular Networks A wide range of applications and research has been done with genome-scale metabolic models. In this work we describe a methodology for comparing metabolic networks constructed from genome-scale metabolic models and how to apply this comparison in order to infer evolutionary distances between different organisms. Our methodology allows a quantification of the metabolic differences between different species from a broad range of families and even kingdoms. This quantification is then applied in order to reconstruct phylogenetic trees for sets of various organisms. |
| title | Phylogenetic tree reconstruction from genome-scale metabolic models |
| topic | Molecular Networks |
| url | https://arxiv.org/abs/1211.7192 |