Accelerating equilibrium isotope effect calculations: II. Stochastic implementation of direct estimators
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| Format: | Preprint |
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2019
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| _version_ | 1866914956346130432 |
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| author | Karandashev, Konstantin Vanicek, Jiri |
| author_facet | Karandashev, Konstantin Vanicek, Jiri |
| contents | Path integral calculations of equilibrium isotope effects and isotopic fractionation are expensive due to the presence of path integral discretization errors, statistical errors, and thermodynamic integration errors. Whereas the discretization errors can be reduced by high-order factorization of the path integral and statistical errors by using centroid virial estimators, two recent papers proposed alternative ways to completely remove the thermodynamic integration errors: Cheng and Ceriotti [J. Chem. Phys. 141, 244112 (2015)] employed a variant of free-energy perturbation called "direct estimators," while Karandashev and Van\'ıček [J. Chem. Phys. 143, 194104 (2017)] combined the thermodynamic integration with a stochastic change of mass and piecewise-linear umbrella biasing potential. Here we combine the former approach with the stochastic change of mass in order to decrease its statistical errors when applied to larger isotope effects, and perform a thorough comparison of different methods by computing isotope effects first on a harmonic model, and then on methane and methanium, where we evaluate all isotope effects of the form $\mathrm{CH}_{\mathrm{4-x}}\mathrm{D}_{\mathrm{x}}/\mathrm{CH}_{4}$ and $\mathrm{CH}_{\mathrm{5-x}}\mathrm{D}^{+}_{\mathrm{x}}/\mathrm{CH}^{+}_{5}$, respectively. We discuss thoroughly the reasons for a surprising behavior of the original method of direct estimators, which performed well for a much larger range of isotope effects than what had been expected previously. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_1909_02910 |
| institution | arXiv |
| publishDate | 2019 |
| record_format | arxiv |
| spellingShingle | Accelerating equilibrium isotope effect calculations: II. Stochastic implementation of direct estimators Karandashev, Konstantin Vanicek, Jiri Chemical Physics Computational Physics Quantum Physics Path integral calculations of equilibrium isotope effects and isotopic fractionation are expensive due to the presence of path integral discretization errors, statistical errors, and thermodynamic integration errors. Whereas the discretization errors can be reduced by high-order factorization of the path integral and statistical errors by using centroid virial estimators, two recent papers proposed alternative ways to completely remove the thermodynamic integration errors: Cheng and Ceriotti [J. Chem. Phys. 141, 244112 (2015)] employed a variant of free-energy perturbation called "direct estimators," while Karandashev and Van\'ıček [J. Chem. Phys. 143, 194104 (2017)] combined the thermodynamic integration with a stochastic change of mass and piecewise-linear umbrella biasing potential. Here we combine the former approach with the stochastic change of mass in order to decrease its statistical errors when applied to larger isotope effects, and perform a thorough comparison of different methods by computing isotope effects first on a harmonic model, and then on methane and methanium, where we evaluate all isotope effects of the form $\mathrm{CH}_{\mathrm{4-x}}\mathrm{D}_{\mathrm{x}}/\mathrm{CH}_{4}$ and $\mathrm{CH}_{\mathrm{5-x}}\mathrm{D}^{+}_{\mathrm{x}}/\mathrm{CH}^{+}_{5}$, respectively. We discuss thoroughly the reasons for a surprising behavior of the original method of direct estimators, which performed well for a much larger range of isotope effects than what had been expected previously. |
| title | Accelerating equilibrium isotope effect calculations: II. Stochastic implementation of direct estimators |
| topic | Chemical Physics Computational Physics Quantum Physics |
| url | https://arxiv.org/abs/1909.02910 |