Statistical Linear Models in Virus Genomic Alignment-free Classification: Application to Hepatitis C Viruses
Fuente:
arXiv
Enregistré dans:
| Auteurs principaux: | Remita, Amine M., Diallo, Abdoulaye Baniré |
|---|---|
| Format: | Preprint |
| Publié: |
2019
|
| Sujets: | |
| Accès en ligne: | |
| Tags: |
Ajouter un tag
Pas de tags, Soyez le premier à ajouter un tag!
|
Documents similaires
MirLibSpark: A Scalable NGS Plant MicroRNA Prediction Pipeline for Multi-Library Functional Annotation
par: Wu, Chao-Jung, et autres
Publié: (2025)
par: Wu, Chao-Jung, et autres
Publié: (2025)
Machine Learning-Based Analysis of Ebola Virus' Impact on Gene Expression in Nonhuman Primates
par: Rezapour, Mostafa, et autres
Publié: (2024)
par: Rezapour, Mostafa, et autres
Publié: (2024)
Enhancing Downstream Analysis in Genome Sequencing: Species Classification While Basecalling
par: Kodra, Riselda, et autres
Publié: (2025)
par: Kodra, Riselda, et autres
Publié: (2025)
Genome-Factory: A Library for Tuning, Deploying, and Interpreting Genomic Foundation Models
par: Wu, Weimin, et autres
Publié: (2025)
par: Wu, Weimin, et autres
Publié: (2025)
A Phylogenetic Approach to Genomic Language Modeling
par: Albors, Carlos, et autres
Publié: (2025)
par: Albors, Carlos, et autres
Publié: (2025)
Uncertainty-Aware Genomic Classification of Alzheimer's Disease: A Transformer-Based Ensemble Approach with Monte Carlo Dropout
par: Jo, Taeho, et autres
Publié: (2025)
par: Jo, Taeho, et autres
Publié: (2025)
Whole-Genome Phenotype Prediction with Machine Learning: Open Problems in Bacterial Genomics
par: James, Tamsin, et autres
Publié: (2025)
par: James, Tamsin, et autres
Publié: (2025)
HAD: Hybrid Architecture Distillation Outperforms Teacher in Genomic Sequence Modeling
par: Yang, Hexiong, et autres
Publié: (2025)
par: Yang, Hexiong, et autres
Publié: (2025)
GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models
par: Liu, Zicheng, et autres
Publié: (2024)
par: Liu, Zicheng, et autres
Publié: (2024)
SPACE: Your Genomic Profile Predictor is a Powerful DNA Foundation Model
par: Yang, Zhao, et autres
Publié: (2025)
par: Yang, Zhao, et autres
Publié: (2025)
DNABERT-2: Fine-Tuning a Genomic Language Model for Colorectal Gene Enhancer Classification
par: King, Darren, et autres
Publié: (2025)
par: King, Darren, et autres
Publié: (2025)
PlantBiMoE: A Bidirectional Foundation Model with SparseMoE for Plant Genomes
par: Lin, Kepeng, et autres
Publié: (2025)
par: Lin, Kepeng, et autres
Publié: (2025)
Embedding Is (Almost) All You Need: Retrieval-Augmented Inference for Generalizable Genomic Prediction Tasks
par: Datta, Nirjhor, et autres
Publié: (2025)
par: Datta, Nirjhor, et autres
Publié: (2025)
A Misclassification Network-Based Method for Comparative Genomic Analysis
par: He, Wan, et autres
Publié: (2024)
par: He, Wan, et autres
Publié: (2024)
Contrastive Deep Learning for Variant Detection in Wastewater Genomic Sequencing
par: Chinda, Adele, et autres
Publié: (2025)
par: Chinda, Adele, et autres
Publié: (2025)
Whole Genome Transformer for Gene Interaction Effects in Microbiome Habitat Specificity
par: Li, Zhufeng, et autres
Publié: (2024)
par: Li, Zhufeng, et autres
Publié: (2024)
Explainable AI in Genomics: Transcription Factor Binding Site Prediction with Mixture of Experts
par: Tripathi, Aakash, et autres
Publié: (2025)
par: Tripathi, Aakash, et autres
Publié: (2025)
TEPI: Taxonomy-aware Embedding and Pseudo-Imaging for Scarcely-labeled Zero-shot Genome Classification
par: Aakur, Sathyanarayanan, et autres
Publié: (2024)
par: Aakur, Sathyanarayanan, et autres
Publié: (2024)
CellBRIDGE: Learning Cellular Trajectories via Interaction-Aware Alignment
par: Estévez, Silas Ruhrberg, et autres
Publié: (2026)
par: Estévez, Silas Ruhrberg, et autres
Publié: (2026)
Entropy, Disagreement, and the Limits of Foundation Models in Genomics
par: Rochkoulets, Maxime, et autres
Publié: (2026)
par: Rochkoulets, Maxime, et autres
Publié: (2026)
Rare Genomic Subtype Discovery from RNA-seq via Autoencoder Embeddings and Stability-Aware Clustering
par: Mezghiche, Alaa
Publié: (2025)
par: Mezghiche, Alaa
Publié: (2025)
AGP: A Novel Arabidopsis thaliana Genomics-Phenomics Dataset and its HyperGraph Baseline Benchmarking
par: Serna-Aguilera, Manuel, et autres
Publié: (2025)
par: Serna-Aguilera, Manuel, et autres
Publié: (2025)
DNA Sequence Classification with Compressors
par: Ozan, Şükrü
Publié: (2024)
par: Ozan, Şükrü
Publié: (2024)
A Pan-cancer Classification Model using Multi-view Feature Selection Method and Ensemble Classifier
par: Chowdhury, Tareque Mohmud, et autres
Publié: (2025)
par: Chowdhury, Tareque Mohmud, et autres
Publié: (2025)
Quantifying Memorization and Privacy Risks in Genomic Language Models
par: Nemecek, Alexander, et autres
Publié: (2026)
par: Nemecek, Alexander, et autres
Publié: (2026)
A Comparative Analysis of Gene Expression Profiling by Statistical and Machine Learning Approaches
par: Bontonou, Myriam, et autres
Publié: (2024)
par: Bontonou, Myriam, et autres
Publié: (2024)
Feature Dimensionality Outweighs Model Complexity in Breast Cancer Subtype Classification Using TCGA-BRCA Gene Expression Data
par: Hasani, Meena Al
Publié: (2026)
par: Hasani, Meena Al
Publié: (2026)
Efficient and Scalable Fine-Tune of Language Models for Genome Understanding
par: Zhan, Huixin, et autres
Publié: (2024)
par: Zhan, Huixin, et autres
Publié: (2024)
Absorb & Escape: Overcoming Single Model Limitations in Generating Genomic Sequences
par: Li, Zehui, et autres
Publié: (2024)
par: Li, Zehui, et autres
Publié: (2024)
Cancer-inspired Genomics Mapper Model for the Generation of Synthetic DNA Sequences with Desired Genomics Signatures
par: Lazebnik, Teddy, et autres
Publié: (2023)
par: Lazebnik, Teddy, et autres
Publié: (2023)
How Private Are DNA Embeddings? Inverting Foundation Model Representations of Genomic Sequences
par: Ouaari, Sofiane, et autres
Publié: (2026)
par: Ouaari, Sofiane, et autres
Publié: (2026)
Celler:A Genomic Language Model for Long-Tailed Single-Cell Annotation
par: Zhao, Huan, et autres
Publié: (2025)
par: Zhao, Huan, et autres
Publié: (2025)
A Multimodal Graph Neural Network Framework of Cancer Molecular Subtype Classification
par: Li, Bingjun, et autres
Publié: (2023)
par: Li, Bingjun, et autres
Publié: (2023)
Unlocking the Power of Multi-institutional Data: Integrating and Harmonizing Genomic Data Across Institutions
par: Chen, Yuan, et autres
Publié: (2024)
par: Chen, Yuan, et autres
Publié: (2024)
MergeDNA: Context-aware Genome Modeling with Dynamic Tokenization through Token Merging
par: Li, Siyuan, et autres
Publié: (2025)
par: Li, Siyuan, et autres
Publié: (2025)
PathoLM: Identifying pathogenicity from the DNA sequence through the Genome Foundation Model
par: Dip, Sajib Acharjee, et autres
Publié: (2024)
par: Dip, Sajib Acharjee, et autres
Publié: (2024)
Comparative Analysis of Multi-Omics Integration Using Advanced Graph Neural Networks for Cancer Classification
par: Alharbi, Fadi, et autres
Publié: (2024)
par: Alharbi, Fadi, et autres
Publié: (2024)
Omni-DNA: A Unified Genomic Foundation Model for Cross-Modal and Multi-Task Learning
par: Li, Zehui, et autres
Publié: (2025)
par: Li, Zehui, et autres
Publié: (2025)
Global Ground Metric Learning with Applications to scRNA data
par: Kühn, Damin, et autres
Publié: (2025)
par: Kühn, Damin, et autres
Publié: (2025)
Genomic Next-Token Predictors are In-Context Learners
par: Breslow, Nathan, et autres
Publié: (2025)
par: Breslow, Nathan, et autres
Publié: (2025)
Documents similaires
-
MirLibSpark: A Scalable NGS Plant MicroRNA Prediction Pipeline for Multi-Library Functional Annotation
par: Wu, Chao-Jung, et autres
Publié: (2025) -
Machine Learning-Based Analysis of Ebola Virus' Impact on Gene Expression in Nonhuman Primates
par: Rezapour, Mostafa, et autres
Publié: (2024) -
Enhancing Downstream Analysis in Genome Sequencing: Species Classification While Basecalling
par: Kodra, Riselda, et autres
Publié: (2025) -
Genome-Factory: A Library for Tuning, Deploying, and Interpreting Genomic Foundation Models
par: Wu, Weimin, et autres
Publié: (2025) -
A Phylogenetic Approach to Genomic Language Modeling
par: Albors, Carlos, et autres
Publié: (2025)