A machine learning approach to investigate regulatory control circuits in bacterial metabolic pathways

Fuente: arXiv
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Main Authors: Bardozzo, Francesco, Lio', Pietro, Tagliaferri, Roberto
Format: Preprint
Published: 2020
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_version_ 1866914742408314880
author Bardozzo, Francesco
Lio', Pietro
Tagliaferri, Roberto
author_facet Bardozzo, Francesco
Lio', Pietro
Tagliaferri, Roberto
contents In this work, a machine learning approach for identifying the multi-omics metabolic regulatory control circuits inside the pathways is described. Therefore, the identification of bacterial metabolic pathways that are more regulated than others in term of their multi-omics follows from the analysis of these circuits . This is a consequence of the alternation of the omic values of codon usage and protein abundance along with the circuits. In this work, the E.Coli's Glycolysis and its multi-omic circuit features are shown as an example.
format Preprint
id arxiv_https___arxiv_org_abs_2001_04794
institution arXiv
publishDate 2020
record_format arxiv
spellingShingle A machine learning approach to investigate regulatory control circuits in bacterial metabolic pathways
Bardozzo, Francesco
Lio', Pietro
Tagliaferri, Roberto
Molecular Networks
Machine Learning
In this work, a machine learning approach for identifying the multi-omics metabolic regulatory control circuits inside the pathways is described. Therefore, the identification of bacterial metabolic pathways that are more regulated than others in term of their multi-omics follows from the analysis of these circuits . This is a consequence of the alternation of the omic values of codon usage and protein abundance along with the circuits. In this work, the E.Coli's Glycolysis and its multi-omic circuit features are shown as an example.
title A machine learning approach to investigate regulatory control circuits in bacterial metabolic pathways
topic Molecular Networks
Machine Learning
url https://arxiv.org/abs/2001.04794