DiMA: Sequence Diversity Dynamics Analyser for Viruses
Fuente:
arXiv
Saved in:
| Main Authors: | Tharanga, Shan, Unlu, Eyyub Selim, Hu, Yongli, Sjaugi, Muhammad Farhan, Celik, Muhammet A., Hekimoglu, Hilal, Miotto, Olivo, Oncel, Muhammed Miran, Khan, Asif M. |
|---|---|
| Format: | Preprint |
| Published: |
2022
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Genomic Insight into Isolates from Fresh Raw Mussels and Ready-to-Eat Stuffed Mussels.
by: Yibar, Artun, et al.
Published: (2025)
by: Yibar, Artun, et al.
Published: (2025)
Quantum Annealing for Enhanced Feature Selection in Single-Cell RNA Sequencing Data Analysis
by: Romero, Selim, et al.
Published: (2024)
by: Romero, Selim, et al.
Published: (2024)
Biological Sequence Clustering: A Survey
by: Zhang, Simeng, et al.
Published: (2026)
by: Zhang, Simeng, et al.
Published: (2026)
MHASS: Microbiome HiFi Amplicon Sequencing Simulator
by: Howard-Stone, Rye, et al.
Published: (2025)
by: Howard-Stone, Rye, et al.
Published: (2025)
DNAMotifTokenizer: Towards Biologically Informed Tokenization of Genomic Sequences
by: Zhou, Xiaoxiao, et al.
Published: (2025)
by: Zhou, Xiaoxiao, et al.
Published: (2025)
Multi-modal single-cell foundation models via dynamic token adaptation
by: Zhao, Wenmin, et al.
Published: (2025)
by: Zhao, Wenmin, et al.
Published: (2025)
Statistical Linear Models in Virus Genomic Alignment-free Classification: Application to Hepatitis C Viruses
by: Remita, Amine M., et al.
Published: (2019)
by: Remita, Amine M., et al.
Published: (2019)
A Graphical Method for Identifying Gene Clusters from RNA Sequencing Data
by: Patock, Jake R., et al.
Published: (2025)
by: Patock, Jake R., et al.
Published: (2025)
The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology
by: Gill, Erin E., et al.
Published: (2024)
by: Gill, Erin E., et al.
Published: (2024)
A Linear Time Quantum Algorithm for Pairwise Sequence Alignment
by: Khan, Md. Rabiul Islam, et al.
Published: (2023)
by: Khan, Md. Rabiul Islam, et al.
Published: (2023)
Comparing Genome Sequencing Methods to Reconstruct the Spread of Piscine Myocarditis Virus in Ireland.
by: Tighe, Andrew J, et al.
Published: (2025)
by: Tighe, Andrew J, et al.
Published: (2025)
SeekRBP: Leveraging Sequence-Structure Integration with Reinforcement Learning for Receptor-Binding Protein Identification
by: Luo, Xiling, et al.
Published: (2026)
by: Luo, Xiling, et al.
Published: (2026)
SeqManager: A Web-Based Tool for Efficient Sequencing Data Storage Management and Duplicate Detection
by: Celerie, Margot, et al.
Published: (2025)
by: Celerie, Margot, et al.
Published: (2025)
Auriculocondylar syndrome 2 caused by a novel PLCB4 variant in a male Chinese neonate: A case report and review of the literature
by: Yongli Zhang, et al.
Published: (2024)
by: Yongli Zhang, et al.
Published: (2024)
Classifying Copy Number Variations Using State Space Modeling of Targeted Sequencing Data: A Case Study in Thalassemia
by: Talbot, Austin, et al.
Published: (2025)
by: Talbot, Austin, et al.
Published: (2025)
DiMA: An LLM-Powered Ride-Hailing Assistant at DiDi
by: Ning, Yansong, et al.
Published: (2025)
by: Ning, Yansong, et al.
Published: (2025)
DNA Sequence Classification with Compressors
by: Ozan, Şükrü
Published: (2024)
by: Ozan, Şükrü
Published: (2024)
CodonMoE: DNA Language Models for mRNA Analyses
by: Du, Shiyi, et al.
Published: (2025)
by: Du, Shiyi, et al.
Published: (2025)
DuAL-Net: A Hybrid Framework for Alzheimer's Disease Prediction from Whole-Genome Sequencing via Local SNP Windows and Global Annotations
by: Lee, Eun Hye, et al.
Published: (2025)
by: Lee, Eun Hye, et al.
Published: (2025)
A Chromosome-level Assembly and Functional Genomic Resources for the Model Annelid Capitella teleta.
by: Davies, Billie E, et al.
Published: (2026)
by: Davies, Billie E, et al.
Published: (2026)
What Can Genome Sequence Data Reveal About Population Viability?
by: Kardos, Marty, et al.
Published: (2025)
by: Kardos, Marty, et al.
Published: (2025)
Identifying the Key Mitochondria‐Related Genes in COPD by Integrating Machine Learning and Bioinformatics Analyses
by: Jiajia Qu, et al.
Published: (2025)
by: Jiajia Qu, et al.
Published: (2025)
Machine Learning-Based Analysis of Ebola Virus' Impact on Gene Expression in Nonhuman Primates
by: Rezapour, Mostafa, et al.
Published: (2024)
by: Rezapour, Mostafa, et al.
Published: (2024)
Optimizing Sample Size for Supervised Machine Learning with Bulk Transcriptomic Sequencing: A Learning Curve Approach
by: Qi, Yunhui, et al.
Published: (2024)
by: Qi, Yunhui, et al.
Published: (2024)
Topological Sequence Analysis of Genomes: Category theory Approaches
by: Liu, Jian, et al.
Published: (2025)
by: Liu, Jian, et al.
Published: (2025)
Bridging Sequence-Structure Alignment in RNA Foundation Models
by: Yang, Heng, et al.
Published: (2024)
by: Yang, Heng, et al.
Published: (2024)
Lyra: An Efficient and Expressive Subquadratic Architecture for Modeling Biological Sequences
by: Ramesh, Krithik, et al.
Published: (2025)
by: Ramesh, Krithik, et al.
Published: (2025)
Contrastive Deep Learning for Variant Detection in Wastewater Genomic Sequencing
by: Chinda, Adele, et al.
Published: (2025)
by: Chinda, Adele, et al.
Published: (2025)
Discovery of Essential Genes as Possible Targets for Prostate Cancer Drug Development
by: Md Amanat Ullah Arman, et al.
Published: (2025)
by: Md Amanat Ullah Arman, et al.
Published: (2025)
Pancancer Analyses of KISS1 as a Potential Biomarker for Tumor Metastasis and Immunotherapy and Therapeutic Target for Breast Cancer
by: Chunbiao Wu, et al.
Published: (2026)
by: Chunbiao Wu, et al.
Published: (2026)
Supplementary information for "Factors influencing the accuracy and precision in dating single gene trees"
by: Louvel, Guillaume, et al.
Published: (2024)
by: Louvel, Guillaume, et al.
Published: (2024)
Confirmation of Exome Sequencing Results Using Sanger Sequencing—Considerations in a Low‐Resource Setting
by: Nadja Louw, et al.
Published: (2026)
by: Nadja Louw, et al.
Published: (2026)
HAD: Hybrid Architecture Distillation Outperforms Teacher in Genomic Sequence Modeling
by: Yang, Hexiong, et al.
Published: (2025)
by: Yang, Hexiong, et al.
Published: (2025)
Caduceus: Bi-Directional Equivariant Long-Range DNA Sequence Modeling
by: Schiff, Yair, et al.
Published: (2024)
by: Schiff, Yair, et al.
Published: (2024)
Embed-Search-Align: DNA Sequence Alignment using Transformer Models
by: Holur, Pavan, et al.
Published: (2023)
by: Holur, Pavan, et al.
Published: (2023)
deepFEPS: Deep Learning-Oriented Feature Extraction for Biological Sequences
by: Ismail, Hamid, et al.
Published: (2025)
by: Ismail, Hamid, et al.
Published: (2025)
Enhancing Downstream Analysis in Genome Sequencing: Species Classification While Basecalling
by: Kodra, Riselda, et al.
Published: (2025)
by: Kodra, Riselda, et al.
Published: (2025)
Whole-genome duplications revealed by macronuclear genomes of five rare species of the model ciliates Paramecium.
by: Ni, Jiahao, et al.
Published: (2025)
by: Ni, Jiahao, et al.
Published: (2025)
GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding
by: Long, Weicai, et al.
Published: (2026)
by: Long, Weicai, et al.
Published: (2026)
VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling
by: Li, Siyuan, et al.
Published: (2024)
by: Li, Siyuan, et al.
Published: (2024)
Similar Items
-
Genomic Insight into Isolates from Fresh Raw Mussels and Ready-to-Eat Stuffed Mussels.
by: Yibar, Artun, et al.
Published: (2025) -
Quantum Annealing for Enhanced Feature Selection in Single-Cell RNA Sequencing Data Analysis
by: Romero, Selim, et al.
Published: (2024) -
Biological Sequence Clustering: A Survey
by: Zhang, Simeng, et al.
Published: (2026) -
MHASS: Microbiome HiFi Amplicon Sequencing Simulator
by: Howard-Stone, Rye, et al.
Published: (2025) -
DNAMotifTokenizer: Towards Biologically Informed Tokenization of Genomic Sequences
by: Zhou, Xiaoxiao, et al.
Published: (2025)