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| Main Authors: | , , , , , |
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| Format: | Preprint |
| Published: |
2022
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| Subjects: | |
| Online Access: | https://arxiv.org/abs/2212.00703 |
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| _version_ | 1866910298925957120 |
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| author | Prothero, Jack B. Jiang, Meilei Hannig, Jan Tran-Dinh, Quoc Ackerman, Andrew Marron, J. S. |
| author_facet | Prothero, Jack B. Jiang, Meilei Hannig, Jan Tran-Dinh, Quoc Ackerman, Andrew Marron, J. S. |
| contents | Modern data collection in many data paradigms, including bioinformatics, often incorporates multiple traits derived from different data types (i.e. platforms). We call this data multi-block, multi-view, or multi-omics data. The emergent field of data integration develops and applies new methods for studying multi-block data and identifying how different data types relate and differ. One major frontier in contemporary data integration research is methodology that can identify partially-shared structure between sub-collections of data types. This work presents a new approach: Data Integration Via Analysis of Subspaces (DIVAS). DIVAS combines new insights in angular subspace perturbation theory with recent developments in matrix signal processing and convex-concave optimization into one algorithm for exploring partially-shared structure. Based on principal angles between subspaces, DIVAS provides built-in inference on the results of the analysis, and is effective even in high-dimension-low-sample-size (HDLSS) situations. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2212_00703 |
| institution | arXiv |
| publishDate | 2022 |
| record_format | arxiv |
| spellingShingle | Data Integration Via Analysis of Subspaces (DIVAS) Prothero, Jack B. Jiang, Meilei Hannig, Jan Tran-Dinh, Quoc Ackerman, Andrew Marron, J. S. Methodology Modern data collection in many data paradigms, including bioinformatics, often incorporates multiple traits derived from different data types (i.e. platforms). We call this data multi-block, multi-view, or multi-omics data. The emergent field of data integration develops and applies new methods for studying multi-block data and identifying how different data types relate and differ. One major frontier in contemporary data integration research is methodology that can identify partially-shared structure between sub-collections of data types. This work presents a new approach: Data Integration Via Analysis of Subspaces (DIVAS). DIVAS combines new insights in angular subspace perturbation theory with recent developments in matrix signal processing and convex-concave optimization into one algorithm for exploring partially-shared structure. Based on principal angles between subspaces, DIVAS provides built-in inference on the results of the analysis, and is effective even in high-dimension-low-sample-size (HDLSS) situations. |
| title | Data Integration Via Analysis of Subspaces (DIVAS) |
| topic | Methodology |
| url | https://arxiv.org/abs/2212.00703 |