Polynomial propagators for classical molecular dynamics
Fuente:
arXiv
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| Formato: | Preprint |
| Publicado: |
2023
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| _version_ | 1866917727941165056 |
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| author | Kondov, Ivan |
| author_facet | Kondov, Ivan |
| contents | Classical molecular dynamics simulation is performed mostly using the established velocity Verlet integrator or other symplectic propagation schemes. In this work, an alternative formulation of numerical propagators for classical molecular dynamics is introduced based on an expansion of the time evolution operator in series of Chebyshev and Newton polynomials. The suggested propagators have, in principle, arbitrary order of accuracy which can be controlled by the choice of expansion order after that the series is truncated. However, the expansion converges only after a minimum number of terms is included in the expansion and this number increases linearly with the time step size. Measurements of the energy drift demonstrate the acceptable long-time stability of the polynomial propagators. It is shown that a system of interacting Lennard-Jones particles is tractable by the proposed technique and that the scaling with the expansion order is only polynomial while the scaling with the number of particles is the same as with the conventional velocity Verlet. The proposed method is, in principle, extendable for further interaction force fields and for integration with a thermostat, and can be parallelized to speed up the computation of every time step. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2302_03516 |
| institution | arXiv |
| publishDate | 2023 |
| record_format | arxiv |
| spellingShingle | Polynomial propagators for classical molecular dynamics Kondov, Ivan Chemical Physics Computational Physics Classical molecular dynamics simulation is performed mostly using the established velocity Verlet integrator or other symplectic propagation schemes. In this work, an alternative formulation of numerical propagators for classical molecular dynamics is introduced based on an expansion of the time evolution operator in series of Chebyshev and Newton polynomials. The suggested propagators have, in principle, arbitrary order of accuracy which can be controlled by the choice of expansion order after that the series is truncated. However, the expansion converges only after a minimum number of terms is included in the expansion and this number increases linearly with the time step size. Measurements of the energy drift demonstrate the acceptable long-time stability of the polynomial propagators. It is shown that a system of interacting Lennard-Jones particles is tractable by the proposed technique and that the scaling with the expansion order is only polynomial while the scaling with the number of particles is the same as with the conventional velocity Verlet. The proposed method is, in principle, extendable for further interaction force fields and for integration with a thermostat, and can be parallelized to speed up the computation of every time step. |
| title | Polynomial propagators for classical molecular dynamics |
| topic | Chemical Physics Computational Physics |
| url | https://arxiv.org/abs/2302.03516 |