Fluctuation relations to calculate protein redox potentials from molecular dynamics simulations
Fuente:
arXiv
Guardado en:
| Autores principales: | Oliveira, A. S. F., Rubio, J., Noble, C. E. M., Anderson, J. L. R., Anders, J., Mulholland, A. J. |
|---|---|
| Formato: | Preprint |
| Publicado: |
2023
|
| Materias: | |
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
Fluctuation-Response Design Rules for Nonequilibrium Flows
por: Yang, Ying-Jen, et al.
Publicado: (2026)
por: Yang, Ying-Jen, et al.
Publicado: (2026)
Nonequilibrium protein complexes as molecular automata
por: Kocka, Jan, et al.
Publicado: (2025)
por: Kocka, Jan, et al.
Publicado: (2025)
Fluctuating Environments Favor Extreme Dormancy Strategies and Penalize Intermediate Ones
por: Hidalgo, Jorge, et al.
Publicado: (2025)
por: Hidalgo, Jorge, et al.
Publicado: (2025)
Fluctuating landscapes and heavy tails in animal behavior
por: Costa, Antonio Carlos, et al.
Publicado: (2023)
por: Costa, Antonio Carlos, et al.
Publicado: (2023)
Unified Linear Fluctuation-Response Theory Arbitrarily Far from Equilibrium
por: Zheng, Jiming, et al.
Publicado: (2025)
por: Zheng, Jiming, et al.
Publicado: (2025)
Efficiently driving F$_1$ molecular motor in experiment by suppressing nonequilibrium variation
por: Mishima, Takahide, et al.
Publicado: (2025)
por: Mishima, Takahide, et al.
Publicado: (2025)
Allosteric communication mediated by protein contact clusters: A dynamical model
por: Ali, Ahmed A. A. I., et al.
Publicado: (2024)
por: Ali, Ahmed A. A. I., et al.
Publicado: (2024)
Thermodynamic inference in molecular motors: a Martingale approach
por: Nadal-Rosa, Adrián, et al.
Publicado: (2025)
por: Nadal-Rosa, Adrián, et al.
Publicado: (2025)
Probing the statistics of sequence-dependent DNA conformations in solution using SAXS
por: Koning, Heidar J., et al.
Publicado: (2025)
por: Koning, Heidar J., et al.
Publicado: (2025)
The Interplay of Heterogeneity and Product Detachment in Templated Polymer Copying
por: Guntoro, Jeremy E. B., et al.
Publicado: (2024)
por: Guntoro, Jeremy E. B., et al.
Publicado: (2024)
Fluctuating environments are sufficient to drive substantial variability in species abundance across locations
por: Henderson, James F. D., et al.
Publicado: (2026)
por: Henderson, James F. D., et al.
Publicado: (2026)
Fixation and Fluctuations in Two-Species Cooperation
por: Piñero, Jordi, et al.
Publicado: (2021)
por: Piñero, Jordi, et al.
Publicado: (2021)
Thermodynamic inference of correlations in nonequilibrium collective dynamics
por: Chatzittofi, Michalis, et al.
Publicado: (2024)
por: Chatzittofi, Michalis, et al.
Publicado: (2024)
Static vs dynamic rough energy landscapes: Where is diffusion faster?
por: Makarov, Dmitrii E., et al.
Publicado: (2025)
por: Makarov, Dmitrii E., et al.
Publicado: (2025)
Network-based drug repurposing for MYH9-related nephritis
por: Ali, Muhammad, et al.
Publicado: (2026)
por: Ali, Muhammad, et al.
Publicado: (2026)
Thermodynamic uncertainty relation for systems with active Ornstein-Uhlenbeck particles
por: Han, Hyeong-Tark, et al.
Publicado: (2024)
por: Han, Hyeong-Tark, et al.
Publicado: (2024)
Iterative improvement of free energy landscape reconstructions with optimal protocols derived from differentiable simulations
por: Cheng, Oliver, et al.
Publicado: (2025)
por: Cheng, Oliver, et al.
Publicado: (2025)
The origin of the Poisson distribution in stochastic dynamics of gene expression
por: Lee, Julian
Publicado: (2022)
por: Lee, Julian
Publicado: (2022)
Sampling a rare protein transition with a hybrid classical-quantum computing algorithm
por: Ghamari, Danial, et al.
Publicado: (2023)
por: Ghamari, Danial, et al.
Publicado: (2023)
Thermodynamic and Stoichiometric Laws Ruling the Fates of Growing Systems
por: Kamimura, Atsushi, et al.
Publicado: (2023)
por: Kamimura, Atsushi, et al.
Publicado: (2023)
Lattice ultrasensitivity amplifies signals in E. coli without fine-tuning
por: Sherry, Derek M., et al.
Publicado: (2024)
por: Sherry, Derek M., et al.
Publicado: (2024)
Membrane-Associated Self-Assembly for Cellular Decision Making
por: Foley, Samuel L., et al.
Publicado: (2025)
por: Foley, Samuel L., et al.
Publicado: (2025)
Entropy Production by Underdamped Langevin Dynamics
por: Lyu, Jinghao, et al.
Publicado: (2024)
por: Lyu, Jinghao, et al.
Publicado: (2024)
Cellular Griffiths-like phase
por: Squillante, Lucas, et al.
Publicado: (2024)
por: Squillante, Lucas, et al.
Publicado: (2024)
Towards a robust approach to infer causality in molecular systems satisfying detailed balance
por: Del Tatto, Vittorio, et al.
Publicado: (2025)
por: Del Tatto, Vittorio, et al.
Publicado: (2025)
Reconstruction of the Bacterial Flagellar Motor's Energy Landscape, Viscous Load, and Torque Generation Across Diffusion Regimes
por: Lopez-Alamilla, N. J., et al.
Publicado: (2025)
por: Lopez-Alamilla, N. J., et al.
Publicado: (2025)
Subconductance states in a semimicroscopic model for a tetrameric pore
por: Ramirez-Piscina, L., et al.
Publicado: (2024)
por: Ramirez-Piscina, L., et al.
Publicado: (2024)
Error Thresholds in Presence of Epistatic Interactions
por: Herrera-Martí, David A.
Publicado: (2024)
por: Herrera-Martí, David A.
Publicado: (2024)
Power laws of natural swarms are fingerprints of an extended critical region
por: González-Albaladejo, R., et al.
Publicado: (2023)
por: González-Albaladejo, R., et al.
Publicado: (2023)
Nonequilibrium Theory for Molecular Machine Design
por: Yang, Ying-Jen, et al.
Publicado: (2026)
por: Yang, Ying-Jen, et al.
Publicado: (2026)
Multiparameter optimal control of F1-ATPase
por: Wareham, W. Callum, et al.
Publicado: (2024)
por: Wareham, W. Callum, et al.
Publicado: (2024)
Flow of Energy and Information in Molecular Machines
por: Leighton, Matthew P., et al.
Publicado: (2024)
por: Leighton, Matthew P., et al.
Publicado: (2024)
Model-free inference of memory in conformational dynamics of a multi-domain protein
por: Vollmar, Leonie, et al.
Publicado: (2024)
por: Vollmar, Leonie, et al.
Publicado: (2024)
Fluctuating Hydrodynamics Describes Transport in Cellular Aggregates
por: Chakraborti, Subhadip, et al.
Publicado: (2024)
por: Chakraborti, Subhadip, et al.
Publicado: (2024)
Phase behaviors and dynamics of active particle systems in double-well potential
por: Chen, Lu, et al.
Publicado: (2024)
por: Chen, Lu, et al.
Publicado: (2024)
Stochastic Thermodynamics of Cooperative Biomolecular Machines: Fluctuation Relations and Hidden Detailed Balance Breaking
por: Piephoff, D. Evan, et al.
Publicado: (2025)
por: Piephoff, D. Evan, et al.
Publicado: (2025)
Theory for sequence selection via phase separation and oligomerization
por: Haugerud, Ivar S., et al.
Publicado: (2024)
por: Haugerud, Ivar S., et al.
Publicado: (2024)
Dissipation at limited resolutions: Power law and detection of hidden dissipative scales
por: Yu, Qiwei, et al.
Publicado: (2024)
por: Yu, Qiwei, et al.
Publicado: (2024)
Dissimilarity measures for generalized Lotka-Volterra systems on networks
por: Márquez, Nicolás A., et al.
Publicado: (2025)
por: Márquez, Nicolás A., et al.
Publicado: (2025)
Information thermodynamics of cellular ion pumps
por: Jiménez-Paz, Julian D., et al.
Publicado: (2025)
por: Jiménez-Paz, Julian D., et al.
Publicado: (2025)
Ejemplares similares
-
Fluctuation-Response Design Rules for Nonequilibrium Flows
por: Yang, Ying-Jen, et al.
Publicado: (2026) -
Nonequilibrium protein complexes as molecular automata
por: Kocka, Jan, et al.
Publicado: (2025) -
Fluctuating Environments Favor Extreme Dormancy Strategies and Penalize Intermediate Ones
por: Hidalgo, Jorge, et al.
Publicado: (2025) -
Fluctuating landscapes and heavy tails in animal behavior
por: Costa, Antonio Carlos, et al.
Publicado: (2023) -
Unified Linear Fluctuation-Response Theory Arbitrarily Far from Equilibrium
por: Zheng, Jiming, et al.
Publicado: (2025)