Memory-Efficient 3D Denoising Diffusion Models for Medical Image Processing

Fuente: arXiv
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Hauptverfasser: Bieder, Florentin, Wolleb, Julia, Durrer, Alicia, Sandkühler, Robin, Cattin, Philippe C.
Format: Preprint
Veröffentlicht: 2023
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author Bieder, Florentin
Wolleb, Julia
Durrer, Alicia
Sandkühler, Robin
Cattin, Philippe C.
author_facet Bieder, Florentin
Wolleb, Julia
Durrer, Alicia
Sandkühler, Robin
Cattin, Philippe C.
contents Denoising diffusion models have recently achieved state-of-the-art performance in many image-generation tasks. They do, however, require a large amount of computational resources. This limits their application to medical tasks, where we often deal with large 3D volumes, like high-resolution three-dimensional data. In this work, we present a number of different ways to reduce the resource consumption for 3D diffusion models and apply them to a dataset of 3D images. The main contribution of this paper is the memory-efficient patch-based diffusion model \textit{PatchDDM}, which can be applied to the total volume during inference while the training is performed only on patches. While the proposed diffusion model can be applied to any image generation tasks, we evaluate the method on the tumor segmentation task of the BraTS2020 dataset and demonstrate that we can generate meaningful three-dimensional segmentations.
format Preprint
id arxiv_https___arxiv_org_abs_2303_15288
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Memory-Efficient 3D Denoising Diffusion Models for Medical Image Processing
Bieder, Florentin
Wolleb, Julia
Durrer, Alicia
Sandkühler, Robin
Cattin, Philippe C.
Computer Vision and Pattern Recognition
Machine Learning
Denoising diffusion models have recently achieved state-of-the-art performance in many image-generation tasks. They do, however, require a large amount of computational resources. This limits their application to medical tasks, where we often deal with large 3D volumes, like high-resolution three-dimensional data. In this work, we present a number of different ways to reduce the resource consumption for 3D diffusion models and apply them to a dataset of 3D images. The main contribution of this paper is the memory-efficient patch-based diffusion model \textit{PatchDDM}, which can be applied to the total volume during inference while the training is performed only on patches. While the proposed diffusion model can be applied to any image generation tasks, we evaluate the method on the tumor segmentation task of the BraTS2020 dataset and demonstrate that we can generate meaningful three-dimensional segmentations.
title Memory-Efficient 3D Denoising Diffusion Models for Medical Image Processing
topic Computer Vision and Pattern Recognition
Machine Learning
url https://arxiv.org/abs/2303.15288