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Bibliographic Details
Main Authors: Muriel, Jorge Carrasco, Cowie, Nicholas, Mansouvar, Marjan, Groves, Teddy, Nielsen, Lars Keld
Format: Preprint
Published: 2023
Subjects:
Online Access:https://arxiv.org/abs/2304.07178
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Table of Contents:
  • Summary: Shu is a visualization tool that integrates diverse data types into a metabolic map, with a focus on supporting multiple conditions and visualizing distributions. The goal is to provide a unified platform for handling the growing volume of multi-omics data, leveraging the metabolic maps developed by the metabolic modeling community. Additionally, shu offers a streamlined python API, based on the Grammar of Graphics, for easy integration with data pipelines. Availability and implementation: Freely available at https://github.com/biosustain/shu under MIT/Apache 2.0 license. Binaries are available in the release page of the repository and the web app is deployed at https://biosustain.github.io/shu.