Imagen de Portada

Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees

Fuente: arXiv

Guardado en:

Detalles Bibliográficos
Autores principales:	Penn, Matthew J, Scheidwasser, Neil, Penn, Joseph, Donnelly, Christl A, Duchêne, David A, Bhatt, Samir
Formato:	Preprint
Publicado:	2023
Materias:	Populations and Evolution Machine Learning
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Phylo2Vec: a vector representation for binary trees
por: Penn, Matthew J, et al.
Publicado: (2023)

Generalised Bayesian distance-based phylogenetics for the genomics era
por: Penn, Matthew J., et al.
Publicado: (2025)

phylo2vec: a library for vector-based phylogenetic tree manipulation
por: Scheidwasser, Neil, et al.
Publicado: (2025)

Phylogenetics in a warm place: computational aspects of the Tropical Grassmannian
por: Bhatt, Samir, et al.
Publicado: (2025)

Characterising rooted and unrooted tree-child networks
por: Döcker, Janosch, et al.
Publicado: (2024)

Cherry picking in forests: A new characterization for the unrooted hybrid number of two phylogenetic trees
por: Huber, Katharina T., et al.
Publicado: (2022)

Colorings of unrooted tree-based networks and related graphs
por: Wilde, Mirko, et al.
Publicado: (2025)

Likelihood-free inference of phylogenetic tree posterior distributions
por: Blassel, Luc, et al.
Publicado: (2025)

Coconvex characters on collections of phylogenetic trees
por: Czabarka, Eva, et al.
Publicado: (2025)

Heat-tree: Cross-platform software for interactive and embeddable phylogenetic tree visualization and editing
por: Foster, Zachary S. L., et al.
Publicado: (2026)

On estimating the effective sample size of phylogenetic trees in an autocorrelated chain
por: Klawitter, Jonathan, et al.
Publicado: (2026)

Neutral phylogenetic models and their role in tree-based biodiversity measures
por: Steel, Mike
Publicado: (2024)

Metaconcepts of rooted tree balance
por: Fischer, Mareike, et al.
Publicado: (2025)

Adapting cluster graphs for inference of continuous trait evolution on phylogenetic networks
por: Teo, Benjamin, et al.
Publicado: (2025)

A sharp lower bound for the number of phylogenetic trees displayed by a tree-child network
por: Semple, Charles, et al.
Publicado: (2025)

0-1 laws for pattern occurrences in phylogenetic trees and networks
por: Bienvenu, François, et al.
Publicado: (2024)

Branch length statistics in phylogenetic trees under constant-rate birth-death dynamics
por: Dieselhorst, Tobias, et al.
Publicado: (2024)

Counting cherry reduction sequences is counting linear extensions (in phylogenetic tree-child networks)
por: Coronado, Tomás M., et al.
Publicado: (2024)

Power-laws in phylogenetic trees and the preferential coalescent
por: Kleinbölting, Stephan, et al.
Publicado: (2025)

Embedding phylogenetic trees in networks of low treewidth
por: van Iersel, Leo, et al.
Publicado: (2022)

Polynomial-time completion of phylogenetic tree sets
por: Koshkarov, Aleksandr, et al.
Publicado: (2026)

Torchtree: flexible phylogenetic model development and inference using PyTorch
por: Fourment, Mathieu, et al.
Publicado: (2024)

Bayesian inference of mixed Gaussian phylogenetic models
por: Brahmantio, Bayu, et al.
Publicado: (2024)

Defining a phylogenetic tree with the minimum number of small-state characters
por: Long, Yangjing, et al.
Publicado: (2025)

A kernel for the maximum agreement forest problem on multiple binary phylogenetic trees
por: Kelk, Steven, et al.
Publicado: (2026)

A complete characterization of pairs of binary phylogenetic trees with identical $A_k$-alignments
por: Wilde, Mirko, et al.
Publicado: (2024)

Siamese networks for Poincaré embeddings and the reconstruction of evolutionary trees
por: Carvallo, Ciro, et al.
Publicado: (2024)

Making mathematical online resources FAIR: at the example of small phylogenetic trees
por: Bacher, Tabea, et al.
Publicado: (2025)

Approximate Bayesian computation for Markovian binary trees in phylogenetics
por: He, Mingqi, et al.
Publicado: (2023)

Inhomogeneous branching trees with symmetric and asymmetric offspring and their genealogies
por: Andersen, Frederik M., et al.
Publicado: (2025)

Combinatorial comparison of general galled trees, time-consistent galled trees, and simplex time-consistent galled trees
por: Agranat-Tamir, Lily, et al.
Publicado: (2026)

A height-based metaconcept for rooted tree balance and its implications for the $B_1$ index
por: Fischer, Mareike, et al.
Publicado: (2026)

Geometry of the space of phylogenetic trees with non-identical leaves
por: Cabrera, Maria Alejandra Valdez, et al.
Publicado: (2025)

Renewal equations for vector-borne diseases
por: Mills, Cathal, et al.
Publicado: (2024)

A 2-approximation algorithm for the softwired parsimony problem on binary, tree-child phylogenetic networks
por: Frohn, Martin, et al.
Publicado: (2024)

The space of multifurcating ranked tree shapes: enumeration, lattice structure, and Markov chains
por: Zhang, Julie, et al.
Publicado: (2025)

On the importance of assessing topological convergence in Bayesian phylogenetic inference
por: Brusselmans, Marius, et al.
Publicado: (2024)

Counting rankings of tree-child networks
por: Zhang, Qiang, et al.
Publicado: (2025)

DendroPy 5: a mature Python library for phylogenetic computing
por: Moreno, Matthew Andres, et al.
Publicado: (2024)

Inhomogeneous continuous-time Markov chains to infer flexible time-varying evolutionary rates
por: Datta, Pratyusa, et al.
Publicado: (2025)