Integrative analysis of ATAC-seq and RNA-seq for cells infected by human T-cell leukemia virus type 1
Fuente:
arXiv
Saved in:
| Main Authors: | Tanaka, Azusa, Ishitsuka, Yasuhiro, Ohta, Hiroki, Takenouchi, Norihiro, Nakagawa, Masanori, Koh, Ki-Ryang, Onishi, Chiho, Tanaka, Hiromitsu, Fujimoto, Akihiro, Yasunaga, Jun-ichirou, Matsuoka, Masao |
|---|---|
| Format: | Preprint |
| Published: |
2023
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Systematic clustering algorithm for chromatin accessibility data and its application to hematopoietic cells
by: Tanaka, Azusa, et al.
Published: (2019)
by: Tanaka, Azusa, et al.
Published: (2019)
Integrated ATAC‐seq and RNA‐seq analysis identifies key regulatory elements in NK cells activated with feeder cells and IL‐2
by: Pedram Motallebnejad, et al.
Published: (2025)
by: Pedram Motallebnejad, et al.
Published: (2025)
A versatile informative diffusion model for single-cell ATAC-seq data generation and analysis
by: Huang, Lei, et al.
Published: (2024)
by: Huang, Lei, et al.
Published: (2024)
ATAC-seq and cut&tag for NF-Y job
by: yang, shichao
Published: (2026)
by: yang, shichao
Published: (2026)
ATAC-seq and cut&tag for NF-Y job
by: yang, shichao
Published: (2026)
by: yang, shichao
Published: (2026)
Ints7-KD mESC ATAC-seq bigWig file for UCSC
by: Shen, Yunfan
Published: (2025)
by: Shen, Yunfan
Published: (2025)
SemiLT: A Multianchor Transfer Learning Method for Cross‐Modality Cell Label Annotation from scRNA‐seq to scATAC‐seq
by: Zhitong Chen, et al.
Published: (2025)
by: Zhitong Chen, et al.
Published: (2025)
Single-cell RNA-seq Analysis of Chicken
by: wang, fei
Published: (2026)
by: wang, fei
Published: (2026)
Online t-SNE for single-cell RNA-seq
by: Ma, Hui, et al.
Published: (2024)
by: Ma, Hui, et al.
Published: (2024)
Integrated Single‐Cell RNA‐seq and ATAC‐seq Reveals Heterogeneous Differentiation of CD4+ Naive T Cell Subsets is Associated with Response to Antidepressant Treatment in Major Depressive Disorder
by: Zuoli Sun, et al.
Published: (2024)
by: Zuoli Sun, et al.
Published: (2024)
WTKO-CNN: Deep Learning Reveals Sequence Motifs Distinguishing Wild-Type and Knockout ATAC-seq Peaks
by: Dey, Lopamudra
Published: (2026)
by: Dey, Lopamudra
Published: (2026)
Bulk RNA-seq of primary leukemia samples Ishikawa 202509
by: Ishikawa, Fumihiko, et al.
Published: (2025)
by: Ishikawa, Fumihiko, et al.
Published: (2025)
RNA-seq data of HMGB1-treated dendritic cells
by: li, Linyu
Published: (2025)
by: li, Linyu
Published: (2025)
Integrated analysis of single‐cell RNA‐seq and bulk RNA‐seq unravels the molecular feature of M2 macrophages of head and neck squamous cell carcinoma
by: Siyuan Wu, et al.
Published: (2024)
by: Siyuan Wu, et al.
Published: (2024)
Prognostic impact of valemetostat in relapsed/refractory adult T‐cell leukaemia‐lymphoma
by: Takafumi Shichijo, et al.
Published: (2025)
by: Takafumi Shichijo, et al.
Published: (2025)
Partial domain adaptation enables cross domain cell type annotation between scRNA-seq and snRNA-seq
by: Chen, Xiran, et al.
Published: (2025)
by: Chen, Xiran, et al.
Published: (2025)
Exponential sums over singular binary quintics
by: Ishitsuka, Yasuhiro
Published: (2026)
by: Ishitsuka, Yasuhiro
Published: (2026)
Quantile-based transformation of bulk RNA-seq into single-cell profiles
by: Gwangju Institute of Science and Technology
Published: (2025)
by: Gwangju Institute of Science and Technology
Published: (2025)
White-Box Diffusion Transformer for single-cell RNA-seq generation
by: Cui, Zhuorui, et al.
Published: (2024)
by: Cui, Zhuorui, et al.
Published: (2024)
Single cell RNA seq of the major cell types in the larva of the sea star, Patiria miniata
by: Nathalie Oulhen, et al.
Published: (2025)
by: Nathalie Oulhen, et al.
Published: (2025)
scRNA-seq and bulk RNA-seq of PBMC
by: Ludwig-Maximilians-Universität München
Published: (2025)
by: Ludwig-Maximilians-Universität München
Published: (2025)
A primer on single‐cell RNA‐seq analysis using dendritic cells as a case study
by: Giulia Protti, et al.
Published: (2024)
by: Giulia Protti, et al.
Published: (2024)
Discovering Interpretable Biological Concepts in Single-cell RNA-seq Foundation Models
by: Claye, Charlotte, et al.
Published: (2025)
by: Claye, Charlotte, et al.
Published: (2025)
Timestamp calibration for time-series single cell RNA-seq expression data
by: Chen, Xiran, et al.
Published: (2024)
by: Chen, Xiran, et al.
Published: (2024)
Sphalerogenesis
by: Tanaka, Masanori
Published: (2025)
by: Tanaka, Masanori
Published: (2025)
A hierarchical, count-based model highlights challenges in scATAC-seq data analysis and points to opportunities to extract finer-resolution information
by: Kwok, Aaron Wing Cheung, et al.
Published: (2025)
by: Kwok, Aaron Wing Cheung, et al.
Published: (2025)
Categorization and analysis of 14 computational methods for estimating cell potency from single-cell RNA-seq data
by: Wang, Qingyang, et al.
Published: (2023)
by: Wang, Qingyang, et al.
Published: (2023)
ltirloni/Ixsc-scRNA-seq: Ixsc-scRNA-seq
by: Lucas Tirloni
Published: (2026)
by: Lucas Tirloni
Published: (2026)
Swath Bathymetry using SeaBeam 2000 around Japan (1) Statistical Estimation of Subduction Seafloor Morphology
by: Nishizawa, Azusa, et al.
Published: (1997)
by: Nishizawa, Azusa, et al.
Published: (1997)
Random Matrix Theory-guided sparse PCA for single-cell RNA-seq data
by: Chardès, Victor
Published: (2025)
by: Chardès, Victor
Published: (2025)
An ultra high‐throughput, massively multiplexable, single‐cell RNA‐seq platform in yeasts
by: Leandra Brettner, et al.
Published: (2024)
by: Leandra Brettner, et al.
Published: (2024)
Uncertainty-aware t-distributed Stochastic Neighbor Embedding for Single-cell RNA-seq Data
by: Ma, Hui, et al.
Published: (2024)
by: Ma, Hui, et al.
Published: (2024)
Evaluating Company-specific Biases in Financial Sentiment Analysis using Large Language Models
by: Nakagawa, Kei, et al.
Published: (2024)
by: Nakagawa, Kei, et al.
Published: (2024)
Basic and other measurements of radiation at station Syowa (1994-01 et seq)
by: Hisamitsu, Junji, et al.
Published: (2023)
by: Hisamitsu, Junji, et al.
Published: (2023)
Persistent Pain Despite Improved Suppuration: A Clinical Clue to Inflammatory Flare in Hidradenitis Suppurativa
by: Yosuke Ishitsuka, et al.
Published: (2026)
by: Yosuke Ishitsuka, et al.
Published: (2026)
Reply to the Letter to the Editor “Testosterone Recovery and Health‐Related Quality of Life After Short‐Term Androgen Deprivation Therapy Combined With Low‐Dose‐Rate Brachytherapy: Limitations and Future Directions”
by: Kenta Onishi, et al.
Published: (2025)
by: Kenta Onishi, et al.
Published: (2025)
scRDiT: Generating single-cell RNA-seq data by diffusion transformers and accelerating sampling
by: Dong, Shengze, et al.
Published: (2024)
by: Dong, Shengze, et al.
Published: (2024)
Explainable AI model reveals disease-related mechanisms in single-cell RNA-seq data
by: Usman, Mohammad, et al.
Published: (2025)
by: Usman, Mohammad, et al.
Published: (2025)
scASDC: Attention Enhanced Structural Deep Clustering for Single-cell RNA-seq Data
by: Min, Wenwen, et al.
Published: (2024)
by: Min, Wenwen, et al.
Published: (2024)
scRNA‐seq determines the characteristics of T cell marker genes to predict the prognosis of esophageal cancer
by: Fang Meng, et al.
Published: (2024)
by: Fang Meng, et al.
Published: (2024)
Similar Items
-
Systematic clustering algorithm for chromatin accessibility data and its application to hematopoietic cells
by: Tanaka, Azusa, et al.
Published: (2019) -
Integrated ATAC‐seq and RNA‐seq analysis identifies key regulatory elements in NK cells activated with feeder cells and IL‐2
by: Pedram Motallebnejad, et al.
Published: (2025) -
A versatile informative diffusion model for single-cell ATAC-seq data generation and analysis
by: Huang, Lei, et al.
Published: (2024) -
ATAC-seq and cut&tag for NF-Y job
by: yang, shichao
Published: (2026) -
ATAC-seq and cut&tag for NF-Y job
by: yang, shichao
Published: (2026)