The exploration-exploitation paradigm for networked biological systems
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arXiv
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| Main Authors: | , |
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| Format: | Preprint |
| Published: |
2023
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| _version_ | 1866914646507651072 |
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| author | Dichio, Vito Fallani, Fabrizio De Vico |
| author_facet | Dichio, Vito Fallani, Fabrizio De Vico |
| contents | The stochastic exploration of the configuration space and the exploitation of functional states underlie many biological processes. The evolutionary dynamics stands out as a remarkable example. Here, we introduce a novel formalism that mimics evolution and encodes a general exploration-exploitation dynamics for biological networks. We apply it to the brain wiring problem, focusing on the maturation of that of the nematode C. elegans. We demonstrate that a parsimonious maxent description of the adult brain combined with our framework is able to track down the entire developmental trajectory. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2306_17300 |
| institution | arXiv |
| publishDate | 2023 |
| record_format | arxiv |
| spellingShingle | The exploration-exploitation paradigm for networked biological systems Dichio, Vito Fallani, Fabrizio De Vico Biological Physics Neurons and Cognition The stochastic exploration of the configuration space and the exploitation of functional states underlie many biological processes. The evolutionary dynamics stands out as a remarkable example. Here, we introduce a novel formalism that mimics evolution and encodes a general exploration-exploitation dynamics for biological networks. We apply it to the brain wiring problem, focusing on the maturation of that of the nematode C. elegans. We demonstrate that a parsimonious maxent description of the adult brain combined with our framework is able to track down the entire developmental trajectory. |
| title | The exploration-exploitation paradigm for networked biological systems |
| topic | Biological Physics Neurons and Cognition |
| url | https://arxiv.org/abs/2306.17300 |