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Main Authors: Cheung, Wing Keung, Pakzad, Ashkan, Mogulkoc, Nesrin, Needleman, Sarah, Rangelov, Bojidar, Gudmundsson, Eyjolfur, Zhao, An, Abbas, Mariam, McLaverty, Davina, Asimakopoulos, Dimitrios, Chapman, Robert, Savas, Recep, Janes, Sam M, Hu, Yipeng, Alexander, Daniel C., Hurst, John R, Jacob, Joseph
Format: Preprint
Published: 2023
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Online Access:https://arxiv.org/abs/2308.00008
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author Cheung, Wing Keung
Pakzad, Ashkan
Mogulkoc, Nesrin
Needleman, Sarah
Rangelov, Bojidar
Gudmundsson, Eyjolfur
Zhao, An
Abbas, Mariam
McLaverty, Davina
Asimakopoulos, Dimitrios
Chapman, Robert
Savas, Recep
Janes, Sam M
Hu, Yipeng
Alexander, Daniel C.
Hurst, John R
Jacob, Joseph
author_facet Cheung, Wing Keung
Pakzad, Ashkan
Mogulkoc, Nesrin
Needleman, Sarah
Rangelov, Bojidar
Gudmundsson, Eyjolfur
Zhao, An
Abbas, Mariam
McLaverty, Davina
Asimakopoulos, Dimitrios
Chapman, Robert
Savas, Recep
Janes, Sam M
Hu, Yipeng
Alexander, Daniel C.
Hurst, John R
Jacob, Joseph
contents The morphology and distribution of airway tree abnormalities enables diagnosis and disease characterisation across a variety of chronic respiratory conditions. In this regard, airway segmentation plays a critical role in the production of the outline of the entire airway tree to enable estimation of disease extent and severity. In this study, we propose a data-centric deep learning technique to segment the airway tree. The proposed technique utilises interpolation and image split to improve data usefulness and quality. Then, an ensemble learning strategy is implemented to aggregate the segmented airway trees at different scales. In terms of segmentation performance (dice similarity coefficient), our method outperforms the baseline model by 2.5% on average when a combined loss is used. Further, our proposed technique has a low GPU usage and high flexibility enabling it to be deployed on any 2D deep learning model.
format Preprint
id arxiv_https___arxiv_org_abs_2308_00008
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Interpolation-Split: a data-centric deep learning approach with big interpolated data to boost airway segmentation performance
Cheung, Wing Keung
Pakzad, Ashkan
Mogulkoc, Nesrin
Needleman, Sarah
Rangelov, Bojidar
Gudmundsson, Eyjolfur
Zhao, An
Abbas, Mariam
McLaverty, Davina
Asimakopoulos, Dimitrios
Chapman, Robert
Savas, Recep
Janes, Sam M
Hu, Yipeng
Alexander, Daniel C.
Hurst, John R
Jacob, Joseph
Image and Video Processing
Machine Learning
The morphology and distribution of airway tree abnormalities enables diagnosis and disease characterisation across a variety of chronic respiratory conditions. In this regard, airway segmentation plays a critical role in the production of the outline of the entire airway tree to enable estimation of disease extent and severity. In this study, we propose a data-centric deep learning technique to segment the airway tree. The proposed technique utilises interpolation and image split to improve data usefulness and quality. Then, an ensemble learning strategy is implemented to aggregate the segmented airway trees at different scales. In terms of segmentation performance (dice similarity coefficient), our method outperforms the baseline model by 2.5% on average when a combined loss is used. Further, our proposed technique has a low GPU usage and high flexibility enabling it to be deployed on any 2D deep learning model.
title Interpolation-Split: a data-centric deep learning approach with big interpolated data to boost airway segmentation performance
topic Image and Video Processing
Machine Learning
url https://arxiv.org/abs/2308.00008