A Bayesian Nonparametric Method to Adjust for Unmeasured Confounding with Negative Controls
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| Format: | Preprint |
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2023
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| _version_ | 1866909355015667712 |
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| author | Hu, Jie Kate Zorzetto, Dafne Dominici, Francesca |
| author_facet | Hu, Jie Kate Zorzetto, Dafne Dominici, Francesca |
| contents | Unmeasured confounding bias threatens the validity of observational studies. While sensitivity analyses and study designs have been proposed to address this issue, they often overlook the growing availability of auxiliary data. Using negative controls from these data is a promising new approach to reduce unmeasured confounding bias. In this article, we develop a Bayesian nonparametric method to estimate a causal exposure-response function (CERF) leveraging information from negative controls to adjust for unmeasured confounding. We model the CERF as a mixture of linear models. This strategy captures the potential nonlinear shape of CERFs while maintaining computational efficiency, and it leverages closed-form results that hold under the linear model assumption. We assess the performance of our method through simulation studies. We found that the proposed method can recover the true shape of the CERF in the presence of unmeasured confounding under assumptions. To show the practical utility of our approach, we apply it to adjust for a possible unmeasured confounder when evaluating the relationship between long-term exposure to ambient $PM_{2.5}$ and cardiovascular hospitalization rates among the elderly in the continental US. We implement our estimation procedure in open-source software and have made the code publicly available to ensure reproducibility. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2309_02631 |
| institution | arXiv |
| publishDate | 2023 |
| record_format | arxiv |
| spellingShingle | A Bayesian Nonparametric Method to Adjust for Unmeasured Confounding with Negative Controls Hu, Jie Kate Zorzetto, Dafne Dominici, Francesca Methodology Applications Unmeasured confounding bias threatens the validity of observational studies. While sensitivity analyses and study designs have been proposed to address this issue, they often overlook the growing availability of auxiliary data. Using negative controls from these data is a promising new approach to reduce unmeasured confounding bias. In this article, we develop a Bayesian nonparametric method to estimate a causal exposure-response function (CERF) leveraging information from negative controls to adjust for unmeasured confounding. We model the CERF as a mixture of linear models. This strategy captures the potential nonlinear shape of CERFs while maintaining computational efficiency, and it leverages closed-form results that hold under the linear model assumption. We assess the performance of our method through simulation studies. We found that the proposed method can recover the true shape of the CERF in the presence of unmeasured confounding under assumptions. To show the practical utility of our approach, we apply it to adjust for a possible unmeasured confounder when evaluating the relationship between long-term exposure to ambient $PM_{2.5}$ and cardiovascular hospitalization rates among the elderly in the continental US. We implement our estimation procedure in open-source software and have made the code publicly available to ensure reproducibility. |
| title | A Bayesian Nonparametric Method to Adjust for Unmeasured Confounding with Negative Controls |
| topic | Methodology Applications |
| url | https://arxiv.org/abs/2309.02631 |