Cluster Exploration using Informative Manifold Projections

Fuente: arXiv
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Hauptverfasser: Gerolymatos, Stavros, Evangelopoulos, Xenophon, Gusev, Vladimir, Goulermas, John Y.
Format: Preprint
Veröffentlicht: 2023
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author Gerolymatos, Stavros
Evangelopoulos, Xenophon
Gusev, Vladimir
Goulermas, John Y.
author_facet Gerolymatos, Stavros
Evangelopoulos, Xenophon
Gusev, Vladimir
Goulermas, John Y.
contents Dimensionality reduction (DR) is one of the key tools for the visual exploration of high-dimensional data and uncovering its cluster structure in two- or three-dimensional spaces. The vast majority of DR methods in the literature do not take into account any prior knowledge a practitioner may have regarding the dataset under consideration. We propose a novel method to generate informative embeddings which not only factor out the structure associated with different kinds of prior knowledge but also aim to reveal any remaining underlying structure. To achieve this, we employ a linear combination of two objectives: firstly, contrastive PCA that discounts the structure associated with the prior information, and secondly, kurtosis projection pursuit which ensures meaningful data separation in the obtained embeddings. We formulate this task as a manifold optimization problem and validate it empirically across a variety of datasets considering three distinct types of prior knowledge. Lastly, we provide an automated framework to perform iterative visual exploration of high-dimensional data.
format Preprint
id arxiv_https___arxiv_org_abs_2309_14857
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Cluster Exploration using Informative Manifold Projections
Gerolymatos, Stavros
Evangelopoulos, Xenophon
Gusev, Vladimir
Goulermas, John Y.
Machine Learning
Human-Computer Interaction
Dimensionality reduction (DR) is one of the key tools for the visual exploration of high-dimensional data and uncovering its cluster structure in two- or three-dimensional spaces. The vast majority of DR methods in the literature do not take into account any prior knowledge a practitioner may have regarding the dataset under consideration. We propose a novel method to generate informative embeddings which not only factor out the structure associated with different kinds of prior knowledge but also aim to reveal any remaining underlying structure. To achieve this, we employ a linear combination of two objectives: firstly, contrastive PCA that discounts the structure associated with the prior information, and secondly, kurtosis projection pursuit which ensures meaningful data separation in the obtained embeddings. We formulate this task as a manifold optimization problem and validate it empirically across a variety of datasets considering three distinct types of prior knowledge. Lastly, we provide an automated framework to perform iterative visual exploration of high-dimensional data.
title Cluster Exploration using Informative Manifold Projections
topic Machine Learning
Human-Computer Interaction
url https://arxiv.org/abs/2309.14857