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Main Author: Waury, Katharina
Format: Preprint
Published: 2023
Subjects:
Online Access:https://arxiv.org/abs/2310.08179
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author Waury, Katharina
author_facet Waury, Katharina
contents Discovery of novel protein biomarkers for clinical applications is an active research field across a manifold of diseases. Despite some successes and progress, the biomarker development pipeline still frequently ends in failure as biomarker candidates cannot be validated or translated to immunoassays. Selection of strong disease biomarker candidates that further constitute suitable targets for antibody binding in immunoassays is thus important. This essential selection step can be supported and rationalized using bioinformatics tools such as protein databases. Here, I present a workflow in the form of decision trees to computationally investigate biomarker candidates and their available affinity reagents in depth. This analysis can identify the most promising biomarker candidates for assay development while minimal time and effort is required.
format Preprint
id arxiv_https___arxiv_org_abs_2310_08179
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Decision Tree for Protein Biomarker Selection for Clinical Applications
Waury, Katharina
Biomolecules
Discovery of novel protein biomarkers for clinical applications is an active research field across a manifold of diseases. Despite some successes and progress, the biomarker development pipeline still frequently ends in failure as biomarker candidates cannot be validated or translated to immunoassays. Selection of strong disease biomarker candidates that further constitute suitable targets for antibody binding in immunoassays is thus important. This essential selection step can be supported and rationalized using bioinformatics tools such as protein databases. Here, I present a workflow in the form of decision trees to computationally investigate biomarker candidates and their available affinity reagents in depth. This analysis can identify the most promising biomarker candidates for assay development while minimal time and effort is required.
title Decision Tree for Protein Biomarker Selection for Clinical Applications
topic Biomolecules
url https://arxiv.org/abs/2310.08179