RetroDiff: Retrosynthesis as Multi-stage Distribution Interpolation
Fuente:
arXiv
Saved in:
| Main Authors: | Wang, Yiming, Song, Yuxuan, Wang, Yiqun, Xu, Minkai, Wang, Rui, Zhou, Hao, Ma, Wei-Ying |
|---|---|
| Format: | Preprint |
| Published: |
2023
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
RetroBridge: Modeling Retrosynthesis with Markov Bridges
by: Igashov, Ilia, et al.
Published: (2023)
by: Igashov, Ilia, et al.
Published: (2023)
Re-evaluating Retrosynthesis Algorithms with Syntheseus
by: Maziarz, Krzysztof, et al.
Published: (2023)
by: Maziarz, Krzysztof, et al.
Published: (2023)
DCFold: Efficient Protein Structure Generation with Single Forward Pass
by: Zhang, Zhe, et al.
Published: (2026)
by: Zhang, Zhe, et al.
Published: (2026)
Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM
by: Gong, Chengyue, et al.
Published: (2025)
by: Gong, Chengyue, et al.
Published: (2025)
DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra
by: Bohde, Montgomery, et al.
Published: (2025)
by: Bohde, Montgomery, et al.
Published: (2025)
Node-Aligned Graph-to-Graph (NAG2G): Elevating Template-Free Deep Learning Approaches in Single-Step Retrosynthesis
by: Yao, Lin, et al.
Published: (2023)
by: Yao, Lin, et al.
Published: (2023)
DPASyn: Mechanism-Aware Drug Synergy Prediction via Dual Attention and Precision-Aware Quantization
by: Nie, Yuxuan, et al.
Published: (2025)
by: Nie, Yuxuan, et al.
Published: (2025)
Retrosynthesis Prediction via Search in (Hyper) Graph
by: Lan, Zixun, et al.
Published: (2024)
by: Lan, Zixun, et al.
Published: (2024)
UAlign: Pushing the Limit of Template-free Retrosynthesis Prediction with Unsupervised SMILES Alignment
by: Zeng, Kaipeng, et al.
Published: (2024)
by: Zeng, Kaipeng, et al.
Published: (2024)
Unleashing the power of computational insights in revealing the complexity of biological systems in the new era of spatial multi-omics
by: Fan, Zhiwei, et al.
Published: (2025)
by: Fan, Zhiwei, et al.
Published: (2025)
Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization
by: Gu, Siyi, et al.
Published: (2024)
by: Gu, Siyi, et al.
Published: (2024)
Enforcing Latent Euclidean Geometry in Single-Cell VAEs for Manifold Interpolation
by: Palma, Alessandro, et al.
Published: (2025)
by: Palma, Alessandro, et al.
Published: (2025)
Neural Graph Matching Improves Retrieval Augmented Generation in Molecular Machine Learning
by: Wang, Runzhong, et al.
Published: (2025)
by: Wang, Runzhong, et al.
Published: (2025)
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing
by: Zhang, Yangtian, et al.
Published: (2023)
by: Zhang, Yangtian, et al.
Published: (2023)
Protect$^*$: Steerable Retrosynthesis through Neuro-Symbolic State Encoding
by: Sathyanarayana, Shreyas Vinaya, et al.
Published: (2026)
by: Sathyanarayana, Shreyas Vinaya, et al.
Published: (2026)
FAFE: Immune Complex Modeling with Geodesic Distance Loss on Noisy Group Frames
by: Wu, Ruidong, et al.
Published: (2024)
by: Wu, Ruidong, et al.
Published: (2024)
Foundation Models for Environmental Science: A Survey of Emerging Frontiers
by: Yu, Runlong, et al.
Published: (2025)
by: Yu, Runlong, et al.
Published: (2025)
PGraphDTA: Improving Drug Target Interaction Prediction using Protein Language Models and Contact Maps
by: Bal, Rakesh, et al.
Published: (2023)
by: Bal, Rakesh, et al.
Published: (2023)
A Symbolic and Statistical Learning Framework to Discover Bioprocessing Regulatory Mechanism: Cell Culture Example
by: Choy, Keilung, et al.
Published: (2025)
by: Choy, Keilung, et al.
Published: (2025)
Equivariant Graph Neural Operator for Modeling 3D Dynamics
by: Xu, Minkai, et al.
Published: (2024)
by: Xu, Minkai, et al.
Published: (2024)
Learning Patient-Specific Spatial Biomarker Dynamics via Operator Learning for Alzheimer's Disease Progression
by: Wang, Jindong, et al.
Published: (2025)
by: Wang, Jindong, et al.
Published: (2025)
Improving Paratope and Epitope Prediction by Multi-Modal Contrastive Learning and Interaction Informativeness Estimation
by: Wang, Zhiwei, et al.
Published: (2024)
by: Wang, Zhiwei, et al.
Published: (2024)
ICODEN: Ordinary Differential Equation Neural Networks for Interval-Censored Data
by: Wang, Haoling, et al.
Published: (2026)
by: Wang, Haoling, et al.
Published: (2026)
EPO: Diverse and Realistic Protein Ensemble Generation via Energy Preference Optimization
by: Sun, Yuancheng, et al.
Published: (2025)
by: Sun, Yuancheng, et al.
Published: (2025)
A Multimodal Foundation Model to Enhance Generalizability and Data Efficiency for Pan-cancer Prognosis Prediction
by: Zhou, Huajun, et al.
Published: (2025)
by: Zhou, Huajun, et al.
Published: (2025)
InfoSEM: A Deep Generative Model with Informative Priors for Gene Regulatory Network Inference
by: Cui, Tianyu, et al.
Published: (2025)
by: Cui, Tianyu, et al.
Published: (2025)
ProteinBench: A Holistic Evaluation of Protein Foundation Models
by: Ye, Fei, et al.
Published: (2024)
by: Ye, Fei, et al.
Published: (2024)
Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshots
by: Ying, Junda, et al.
Published: (2026)
by: Ying, Junda, et al.
Published: (2026)
scDrugMap: Benchmarking Large Foundation Models for Drug Response Prediction
by: Wang, Qing, et al.
Published: (2025)
by: Wang, Qing, et al.
Published: (2025)
Dual-stage optimizer for systematic overestimation adjustment applied to multi-objective genetic algorithms for biomarker selection
by: Cattelani, Luca, et al.
Published: (2023)
by: Cattelani, Luca, et al.
Published: (2023)
Molecular Odor Prediction Based on Multi-Feature Graph Attention Networks
by: Xie, HongXin, et al.
Published: (2025)
by: Xie, HongXin, et al.
Published: (2025)
MKDTI: Predicting drug-target interactions via multiple kernel fusion on graph attention network
by: Zhou, Yuhuan, et al.
Published: (2024)
by: Zhou, Yuhuan, et al.
Published: (2024)
HiGraphDTI: Hierarchical Graph Representation Learning for Drug-Target Interaction Prediction
by: Liu, Bin, et al.
Published: (2024)
by: Liu, Bin, et al.
Published: (2024)
MIN: Multi-channel Interaction Network for Drug-Target Interaction with Protein Distillation
by: Li, Shuqi, et al.
Published: (2024)
by: Li, Shuqi, et al.
Published: (2024)
Molecule-dynamic-based Aging Clock and Aging Roadmap Forecast with Sundial
by: Wu, Wei, et al.
Published: (2025)
by: Wu, Wei, et al.
Published: (2025)
PTransIPs: Identification of phosphorylation sites enhanced by protein PLM embeddings
by: Xu, Ziyang, et al.
Published: (2023)
by: Xu, Ziyang, et al.
Published: (2023)
Graph Fourier Neural ODEs: Modeling Spatial-temporal Multi-scales in Molecular Dynamics
by: Sun, Fang, et al.
Published: (2024)
by: Sun, Fang, et al.
Published: (2024)
Protenix-Mini+: efficient structure prediction model with scalable pairformer
by: Qiang, Bo, et al.
Published: (2025)
by: Qiang, Bo, et al.
Published: (2025)
MC-NN: An End-to-End Multi-Channel Neural Network Approach for Predicting Influenza A Virus Hosts and Antigenic Types
by: Xu, Yanhua, et al.
Published: (2023)
by: Xu, Yanhua, et al.
Published: (2023)
Distribution Learning for Molecular Regression
by: Shoghi, Nima, et al.
Published: (2024)
by: Shoghi, Nima, et al.
Published: (2024)
Similar Items
-
RetroBridge: Modeling Retrosynthesis with Markov Bridges
by: Igashov, Ilia, et al.
Published: (2023) -
Re-evaluating Retrosynthesis Algorithms with Syntheseus
by: Maziarz, Krzysztof, et al.
Published: (2023) -
DCFold: Efficient Protein Structure Generation with Single Forward Pass
by: Zhang, Zhe, et al.
Published: (2026) -
Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM
by: Gong, Chengyue, et al.
Published: (2025) -
DiffMS: Diffusion Generation of Molecules Conditioned on Mass Spectra
by: Bohde, Montgomery, et al.
Published: (2025)