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Community recommendations on cryoEM data archiving and validation

Fuente: arXiv

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Bibliographic Details
Main Authors:	Kleywegt, Gerard J., Adams, Paul D., Butcher, Sarah J., Lawson, Cathy, Rohou, Alexis, Rosenthal, Peter B., Subramaniam, Sriram, Topf, Maya, Abbott, Sanja, Baldwin, Philip R., Berrisford, John M., Bricogne, Gérard, Choudhary, Preeti, Croll, Tristan I., Danev, Radostin, Ganesan, Sai J., Grant, Timothy, Gutmanas, Aleksandras, Henderson, Richard, Heymann, J. Bernard, Huiskonen, Juha T., Istrate, Andrei, Kato, Takayuki, Lander, Gabriel C., Lok, Shee-Mei, Ludtke, Steven J., Murshudov, Garib N., Pye, Ryan, Pintilie, Grigore D., Richardson, Jane S., Sachse, Carsten, Salih, Osman, Scheres, Sjors H. W., Schroeder, Gunnar F., Sorzano, Carlos Oscar S., Stagg, Scott M., Wang, Zhe, Warshamanage, Rangana, Westbrook, John D., Winn, Martyn D., Young, Jasmine Y., Burley, Stephen K., Hoch, Jeffrey C., Kurisu, Genji, Morris, Kyle, Patwardhan, Ardan, Velankar, Sameer
Format:	Preprint
Published:	2023
Subjects:	Biomolecules
Online Access:	Acceder al recurso
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_version_	1866913255840022528
author	Kleywegt, Gerard J. Adams, Paul D. Butcher, Sarah J. Lawson, Cathy Rohou, Alexis Rosenthal, Peter B. Subramaniam, Sriram Topf, Maya Abbott, Sanja Baldwin, Philip R. Berrisford, John M. Bricogne, Gérard Choudhary, Preeti Croll, Tristan I. Danev, Radostin Ganesan, Sai J. Grant, Timothy Gutmanas, Aleksandras Henderson, Richard Heymann, J. Bernard Huiskonen, Juha T. Istrate, Andrei Kato, Takayuki Lander, Gabriel C. Lok, Shee-Mei Ludtke, Steven J. Murshudov, Garib N. Pye, Ryan Pintilie, Grigore D. Richardson, Jane S. Sachse, Carsten Salih, Osman Scheres, Sjors H. W. Schroeder, Gunnar F. Sorzano, Carlos Oscar S. Stagg, Scott M. Wang, Zhe Warshamanage, Rangana Westbrook, John D. Winn, Martyn D. Young, Jasmine Y. Burley, Stephen K. Hoch, Jeffrey C. Kurisu, Genji Morris, Kyle Patwardhan, Ardan Velankar, Sameer
author_facet	Kleywegt, Gerard J. Adams, Paul D. Butcher, Sarah J. Lawson, Cathy Rohou, Alexis Rosenthal, Peter B. Subramaniam, Sriram Topf, Maya Abbott, Sanja Baldwin, Philip R. Berrisford, John M. Bricogne, Gérard Choudhary, Preeti Croll, Tristan I. Danev, Radostin Ganesan, Sai J. Grant, Timothy Gutmanas, Aleksandras Henderson, Richard Heymann, J. Bernard Huiskonen, Juha T. Istrate, Andrei Kato, Takayuki Lander, Gabriel C. Lok, Shee-Mei Ludtke, Steven J. Murshudov, Garib N. Pye, Ryan Pintilie, Grigore D. Richardson, Jane S. Sachse, Carsten Salih, Osman Scheres, Sjors H. W. Schroeder, Gunnar F. Sorzano, Carlos Oscar S. Stagg, Scott M. Wang, Zhe Warshamanage, Rangana Westbrook, John D. Winn, Martyn D. Young, Jasmine Y. Burley, Stephen K. Hoch, Jeffrey C. Kurisu, Genji Morris, Kyle Patwardhan, Ardan Velankar, Sameer
contents	In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 45 experts in data processing, model building and refinement, validation, and archiving of such structures. This report describes the workshop's motivation and history, the topics discussed, and consensus recommendations resulting from the workshop. Some challenges for future methods-development efforts in this area are also highlighted, as is the implementation to date of some of the recommendations.
format	Preprint
id	arxiv_https___arxiv_org_abs_2311_17640
institution	arXiv
publishDate	2023
record_format	arxiv
spellingShingle	Community recommendations on cryoEM data archiving and validation Kleywegt, Gerard J. Adams, Paul D. Butcher, Sarah J. Lawson, Cathy Rohou, Alexis Rosenthal, Peter B. Subramaniam, Sriram Topf, Maya Abbott, Sanja Baldwin, Philip R. Berrisford, John M. Bricogne, Gérard Choudhary, Preeti Croll, Tristan I. Danev, Radostin Ganesan, Sai J. Grant, Timothy Gutmanas, Aleksandras Henderson, Richard Heymann, J. Bernard Huiskonen, Juha T. Istrate, Andrei Kato, Takayuki Lander, Gabriel C. Lok, Shee-Mei Ludtke, Steven J. Murshudov, Garib N. Pye, Ryan Pintilie, Grigore D. Richardson, Jane S. Sachse, Carsten Salih, Osman Scheres, Sjors H. W. Schroeder, Gunnar F. Sorzano, Carlos Oscar S. Stagg, Scott M. Wang, Zhe Warshamanage, Rangana Westbrook, John D. Winn, Martyn D. Young, Jasmine Y. Burley, Stephen K. Hoch, Jeffrey C. Kurisu, Genji Morris, Kyle Patwardhan, Ardan Velankar, Sameer Biomolecules In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 45 experts in data processing, model building and refinement, validation, and archiving of such structures. This report describes the workshop's motivation and history, the topics discussed, and consensus recommendations resulting from the workshop. Some challenges for future methods-development efforts in this area are also highlighted, as is the implementation to date of some of the recommendations.
title	Community recommendations on cryoEM data archiving and validation
topic	Biomolecules
url	https://arxiv.org/abs/2311.17640