GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization

Fuente: arXiv
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Main Authors: Lu, Yingzhou, Shen, Minjie, Yue, Ling, Li, Chenhao, Chen, Lulu, Meng, Fan, Wang, Xiao, Herrington, David, Wang, Yue, Zhao, Yue, Fu, Tianfan, Van Rechem, Capucine
Format: Preprint
Published: 2023
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author Lu, Yingzhou
Shen, Minjie
Yue, Ling
Li, Chenhao
Chen, Lulu
Meng, Fan
Wang, Xiao
Herrington, David
Wang, Yue
Zhao, Yue
Fu, Tianfan
Van Rechem, Capucine
author_facet Lu, Yingzhou
Shen, Minjie
Yue, Ling
Li, Chenhao
Chen, Lulu
Meng, Fan
Wang, Xiao
Herrington, David
Wang, Yue
Zhao, Yue
Fu, Tianfan
Van Rechem, Capucine
contents The surge in high-throughput omics data has reshaped the landscape of biological research, underlining the need for powerful, user-friendly data analysis and interpretation tools. This paper presents GenoCraft, a web-based comprehensive software solution designed to handle the entire pipeline of omics data processing. GenoCraft offers a unified platform featuring advanced bioinformatics tools, covering all aspects of omics data analysis. It encompasses a range of functionalities, such as normalization, quality control, differential analysis, network analysis, pathway analysis, and diverse visualization techniques. This software makes state-of-the-art omics data analysis more accessible to a wider range of users. With GenoCraft, researchers and data scientists have access to an array of cutting-edge bioinformatics tools under a user-friendly interface, making it a valuable resource for managing and analyzing large-scale omics data. The API with an interactive web interface is publicly available at https://genocraft.stanford. edu/. We also release all the codes in https://github.com/futianfan/GenoCraft.
format Preprint
id arxiv_https___arxiv_org_abs_2312_14249
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization
Lu, Yingzhou
Shen, Minjie
Yue, Ling
Li, Chenhao
Chen, Lulu
Meng, Fan
Wang, Xiao
Herrington, David
Wang, Yue
Zhao, Yue
Fu, Tianfan
Van Rechem, Capucine
Genomics
Machine Learning
The surge in high-throughput omics data has reshaped the landscape of biological research, underlining the need for powerful, user-friendly data analysis and interpretation tools. This paper presents GenoCraft, a web-based comprehensive software solution designed to handle the entire pipeline of omics data processing. GenoCraft offers a unified platform featuring advanced bioinformatics tools, covering all aspects of omics data analysis. It encompasses a range of functionalities, such as normalization, quality control, differential analysis, network analysis, pathway analysis, and diverse visualization techniques. This software makes state-of-the-art omics data analysis more accessible to a wider range of users. With GenoCraft, researchers and data scientists have access to an array of cutting-edge bioinformatics tools under a user-friendly interface, making it a valuable resource for managing and analyzing large-scale omics data. The API with an interactive web interface is publicly available at https://genocraft.stanford. edu/. We also release all the codes in https://github.com/futianfan/GenoCraft.
title GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization
topic Genomics
Machine Learning
url https://arxiv.org/abs/2312.14249