Unsupervised Learning of Phylogenetic Trees via Split-Weight Embedding
Fuente:
arXiv
Saved in:
| Main Authors: | Kong, Yibo, Tiley, George P., Solis-Lemus, Claudia |
|---|---|
| Format: | Preprint |
| Published: |
2023
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
PhyloVAE: Unsupervised Learning of Phylogenetic Trees via Variational Autoencoders
by: Xie, Tianyu, et al.
Published: (2025)
by: Xie, Tianyu, et al.
Published: (2025)
Phylogenetic Tree Inference with Tropical Axial Attention
by: Teska, Chris, et al.
Published: (2026)
by: Teska, Chris, et al.
Published: (2026)
PhyloGFN: Phylogenetic inference with generative flow networks
by: Zhou, Mingyang, et al.
Published: (2023)
by: Zhou, Mingyang, et al.
Published: (2023)
On the Approximation of Phylogenetic Distance Functions by Artificial Neural Networks
by: Rosenzweig, Benjamin K., et al.
Published: (2025)
by: Rosenzweig, Benjamin K., et al.
Published: (2025)
PhylaFlow: Hybrid Flow Matching in Billera-Holmes-Vogtmann Tree Space for Phylogenetic Inference
by: Ektefaie, Yasha, et al.
Published: (2026)
by: Ektefaie, Yasha, et al.
Published: (2026)
Generalized Machine Learning for Fast Calibration of Agent-Based Epidemic Models
by: Najafzadehkhoei, Sima, et al.
Published: (2025)
by: Najafzadehkhoei, Sima, et al.
Published: (2025)
Solving the Tree Containment Problem Using Graph Neural Networks
by: Dushatskiy, Arkadiy, et al.
Published: (2024)
by: Dushatskiy, Arkadiy, et al.
Published: (2024)
Reinforcement Learning for Control of Non-Markovian Cellular Population Dynamics
by: Kratz, Josiah C., et al.
Published: (2024)
by: Kratz, Josiah C., et al.
Published: (2024)
An Ecologically-Informed Deep Learning Framework for Interpretable and Validatable Habitat Mapping
by: Benavides-Martínez, Iván Felipe, et al.
Published: (2025)
by: Benavides-Martínez, Iván Felipe, et al.
Published: (2025)
Controlling Fish Schools via Reinforcement Learning of Virtual Fish Movement
by: Nishii, Yusuke, et al.
Published: (2026)
by: Nishii, Yusuke, et al.
Published: (2026)
Cross-Country Learning for National Infectious Disease Forecasting Using European Data
by: Komodromos, Zacharias, et al.
Published: (2026)
by: Komodromos, Zacharias, et al.
Published: (2026)
Exploring the Dynamics of Lotka-Volterra Systems: Efficiency, Extinction Order, and Predictive Machine Learning
by: Vafaie, Sepideh, et al.
Published: (2024)
by: Vafaie, Sepideh, et al.
Published: (2024)
A Deep Reinforcement Learning Framework for Closed-loop Guidance of Fish Schools via Virtual Agents
by: Shibayama, Takato, et al.
Published: (2026)
by: Shibayama, Takato, et al.
Published: (2026)
The land use-climate change-biodiversity nexus in European islands stakeholders
by: Moustakas, Aristides, et al.
Published: (2025)
by: Moustakas, Aristides, et al.
Published: (2025)
Estimation of Phylogenetic Tree using Gene Sequencing Data
by: Rafiuddin, S M
Published: (2025)
by: Rafiuddin, S M
Published: (2025)
Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees
by: Penn, Matthew J, et al.
Published: (2023)
by: Penn, Matthew J, et al.
Published: (2023)
Contrastive losses as generalized models of global epistasis
by: Brookes, David H., et al.
Published: (2023)
by: Brookes, David H., et al.
Published: (2023)
Plant species richness prediction from DESIS hyperspectral data: A comparison study on feature extraction procedures and regression models
by: Guo, Yiqing, et al.
Published: (2023)
by: Guo, Yiqing, et al.
Published: (2023)
FREE: The Foundational Semantic Recognition for Modeling Environmental Ecosystems
by: Luo, Shiyuan, et al.
Published: (2023)
by: Luo, Shiyuan, et al.
Published: (2023)
A self-supervised neural-analytic method to predict the evolution of COVID-19 in Romania
by: Stochiţoiu, Radu D., et al.
Published: (2020)
by: Stochiţoiu, Radu D., et al.
Published: (2020)
Circuit design in biology and machine learning. II. Anomaly detection
by: Frank, Steven A.
Published: (2024)
by: Frank, Steven A.
Published: (2024)
Investigating Forecasting Models for Pandemic Infections Using Heterogeneous Data Sources: A 2-year Study with COVID-19
by: Komodromos, Zacharias, et al.
Published: (2025)
by: Komodromos, Zacharias, et al.
Published: (2025)
Conditionally Site-Independent Neural Evolution of Antibody Sequences
by: Lu, Stephen Zhewen, et al.
Published: (2026)
by: Lu, Stephen Zhewen, et al.
Published: (2026)
Adapting Physics-Informed Neural Networks to Improve ODE Optimization in Mosquito Population Dynamics
by: Cuong, Dinh Viet, et al.
Published: (2024)
by: Cuong, Dinh Viet, et al.
Published: (2024)
Nested Inheritance Dynamics
by: Moraffah, Bahman
Published: (2024)
by: Moraffah, Bahman
Published: (2024)
Generative diffusion models for spatiotemporal influenza forecasting
by: Lemaitre, Joseph, et al.
Published: (2026)
by: Lemaitre, Joseph, et al.
Published: (2026)
Siamese networks for Poincaré embeddings and the reconstruction of evolutionary trees
by: Carvallo, Ciro, et al.
Published: (2024)
by: Carvallo, Ciro, et al.
Published: (2024)
Meta-autoencoders: An approach to discovery and representation of relationships between dynamically evolving classes
by: Marron, Assaf, et al.
Published: (2025)
by: Marron, Assaf, et al.
Published: (2025)
Forecasting infectious disease prevalence with associated uncertainty using neural networks
by: Morris, Michael
Published: (2024)
by: Morris, Michael
Published: (2024)
Training Flexible Models of Genetic Variant Effects from Functional Annotations using Accelerated Linear Algebra
by: Amin, Alan N., et al.
Published: (2025)
by: Amin, Alan N., et al.
Published: (2025)
The Price equation reveals a universal force-metric-bias law of algorithmic learning and natural selection
by: Frank, Steven A.
Published: (2025)
by: Frank, Steven A.
Published: (2025)
Emergenet: A Digital Twin of Sequence Evolution for Scalable Emergence Risk Assessment of Animal Influenza A Strains
by: Wu, Kevin Yuanbo, et al.
Published: (2024)
by: Wu, Kevin Yuanbo, et al.
Published: (2024)
abx_amr_simulator: A simulation environment for antibiotic prescribing policy optimization under antimicrobial resistance
by: Lee, Joyce, et al.
Published: (2026)
by: Lee, Joyce, et al.
Published: (2026)
Geometric framework for biological evolution
by: Vanchurin, Vitaly
Published: (2026)
by: Vanchurin, Vitaly
Published: (2026)
Fused Lasso Improves Accuracy of Co-occurrence Network Inference in Grouped Samples
by: Agyapong, Daniel, et al.
Published: (2025)
by: Agyapong, Daniel, et al.
Published: (2025)
Deep Generative Models of Evolution: SNP-level Population Adaptation by Genomic Linkage Incorporation
by: Siekiera, Julia, et al.
Published: (2025)
by: Siekiera, Julia, et al.
Published: (2025)
Spatio-temporal stochastic graph-based learning for infectious disease forecasting
by: Valenzuela, Luz Stefani Sotomayor, et al.
Published: (2026)
by: Valenzuela, Luz Stefani Sotomayor, et al.
Published: (2026)
Decoding Positive Selection in Mycobacterium tuberculosis with Phylogeny-Guided Graph Attention Models
by: Wang, Linfeng, et al.
Published: (2025)
by: Wang, Linfeng, et al.
Published: (2025)
Improving Tree Probability Estimation with Stochastic Optimization and Variance Reduction
by: Xie, Tianyu, et al.
Published: (2024)
by: Xie, Tianyu, et al.
Published: (2024)
Modelling Species Distributions with Deep Learning to Predict Plant Extinction Risk and Assess Climate Change Impacts
by: Estopinan, Joaquim, et al.
Published: (2024)
by: Estopinan, Joaquim, et al.
Published: (2024)
Similar Items
-
PhyloVAE: Unsupervised Learning of Phylogenetic Trees via Variational Autoencoders
by: Xie, Tianyu, et al.
Published: (2025) -
Phylogenetic Tree Inference with Tropical Axial Attention
by: Teska, Chris, et al.
Published: (2026) -
PhyloGFN: Phylogenetic inference with generative flow networks
by: Zhou, Mingyang, et al.
Published: (2023) -
On the Approximation of Phylogenetic Distance Functions by Artificial Neural Networks
by: Rosenzweig, Benjamin K., et al.
Published: (2025) -
PhylaFlow: Hybrid Flow Matching in Billera-Holmes-Vogtmann Tree Space for Phylogenetic Inference
by: Ektefaie, Yasha, et al.
Published: (2026)