Joining Forces for Pathology Diagnostics with AI Assistance: The EMPAIA Initiative

Fuente: arXiv
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Autores principales: Zerbe, Norman, Schwen, Lars Ole, Geißler, Christian, Wiesemann, Katja, Bisson, Tom, Boor, Peter, Carvalho, Rita, Franz, Michael, Jansen, Christoph, Kiehl, Tim-Rasmus, Lindequist, Björn, Pohlan, Nora Charlotte, Schmell, Sarah, Strohmenger, Klaus, Zakrzewski, Falk, Plass, Markus, Takla, Michael, Küster, Tobias, Homeyer, André, Hufnagl, Peter
Formato: Preprint
Publicado: 2023
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author Zerbe, Norman
Schwen, Lars Ole
Geißler, Christian
Wiesemann, Katja
Bisson, Tom
Boor, Peter
Carvalho, Rita
Franz, Michael
Jansen, Christoph
Kiehl, Tim-Rasmus
Lindequist, Björn
Pohlan, Nora Charlotte
Schmell, Sarah
Strohmenger, Klaus
Zakrzewski, Falk
Plass, Markus
Takla, Michael
Küster, Tobias
Homeyer, André
Hufnagl, Peter
author_facet Zerbe, Norman
Schwen, Lars Ole
Geißler, Christian
Wiesemann, Katja
Bisson, Tom
Boor, Peter
Carvalho, Rita
Franz, Michael
Jansen, Christoph
Kiehl, Tim-Rasmus
Lindequist, Björn
Pohlan, Nora Charlotte
Schmell, Sarah
Strohmenger, Klaus
Zakrzewski, Falk
Plass, Markus
Takla, Michael
Küster, Tobias
Homeyer, André
Hufnagl, Peter
contents Over the past decade, artificial intelligence (AI) methods in pathology have advanced substantially. However, integration into routine clinical practice has been slow due to numerous challenges, including technical and regulatory hurdles in translating research results into clinical diagnostic products and the lack of standardized interfaces. The open and vendor-neutral EMPAIA initiative addresses these challenges. Here, we provide an overview of EMPAIA's achievements and lessons learned. EMPAIA integrates various stakeholders of the pathology AI ecosystem, i.e., pathologists, computer scientists, and industry. In close collaboration, we developed technical interoperability standards, recommendations for AI testing and product development, and explainability methods. We implemented the modular and open-source EMPAIA platform and successfully integrated 14 AI-based image analysis apps from 8 different vendors, demonstrating how different apps can use a single standardized interface. We prioritized requirements and evaluated the use of AI in real clinical settings with 14 different pathology laboratories in Europe and Asia. In addition to technical developments, we created a forum for all stakeholders to share information and experiences on digital pathology and AI. Commercial, clinical, and academic stakeholders can now adopt EMPAIA's common open-source interfaces, providing a unique opportunity for large-scale standardization and streamlining of processes. Further efforts are needed to effectively and broadly establish AI assistance in routine laboratory use. To this end, a sustainable infrastructure, the non-profit association EMPAIA International, has been established to continue standardization and support broad implementation and advocacy for an AI-assisted digital pathology future.
format Preprint
id arxiv_https___arxiv_org_abs_2401_09450
institution arXiv
publishDate 2023
record_format arxiv
spellingShingle Joining Forces for Pathology Diagnostics with AI Assistance: The EMPAIA Initiative
Zerbe, Norman
Schwen, Lars Ole
Geißler, Christian
Wiesemann, Katja
Bisson, Tom
Boor, Peter
Carvalho, Rita
Franz, Michael
Jansen, Christoph
Kiehl, Tim-Rasmus
Lindequist, Björn
Pohlan, Nora Charlotte
Schmell, Sarah
Strohmenger, Klaus
Zakrzewski, Falk
Plass, Markus
Takla, Michael
Küster, Tobias
Homeyer, André
Hufnagl, Peter
Computers and Society
Artificial Intelligence
Computer Vision and Pattern Recognition
Human-Computer Interaction
Over the past decade, artificial intelligence (AI) methods in pathology have advanced substantially. However, integration into routine clinical practice has been slow due to numerous challenges, including technical and regulatory hurdles in translating research results into clinical diagnostic products and the lack of standardized interfaces. The open and vendor-neutral EMPAIA initiative addresses these challenges. Here, we provide an overview of EMPAIA's achievements and lessons learned. EMPAIA integrates various stakeholders of the pathology AI ecosystem, i.e., pathologists, computer scientists, and industry. In close collaboration, we developed technical interoperability standards, recommendations for AI testing and product development, and explainability methods. We implemented the modular and open-source EMPAIA platform and successfully integrated 14 AI-based image analysis apps from 8 different vendors, demonstrating how different apps can use a single standardized interface. We prioritized requirements and evaluated the use of AI in real clinical settings with 14 different pathology laboratories in Europe and Asia. In addition to technical developments, we created a forum for all stakeholders to share information and experiences on digital pathology and AI. Commercial, clinical, and academic stakeholders can now adopt EMPAIA's common open-source interfaces, providing a unique opportunity for large-scale standardization and streamlining of processes. Further efforts are needed to effectively and broadly establish AI assistance in routine laboratory use. To this end, a sustainable infrastructure, the non-profit association EMPAIA International, has been established to continue standardization and support broad implementation and advocacy for an AI-assisted digital pathology future.
title Joining Forces for Pathology Diagnostics with AI Assistance: The EMPAIA Initiative
topic Computers and Society
Artificial Intelligence
Computer Vision and Pattern Recognition
Human-Computer Interaction
url https://arxiv.org/abs/2401.09450