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Autori principali: Liu, Chun, Wang, Cheng, Wang, Yiwei
Natura: Preprint
Pubblicazione: 2024
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Accesso online:https://arxiv.org/abs/2402.03731
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author Liu, Chun
Wang, Cheng
Wang, Yiwei
author_facet Liu, Chun
Wang, Cheng
Wang, Yiwei
contents In this paper, we provide a detailed theoretical analysis of the numerical scheme introduced in J. Comput. Phys. 436 (2021) 110253 for the reaction kinetics of a class of chemical reaction networks that satisfies detailed balance condition. In contrast to conventional numerical approximations, which are typically constructed based on ordinary differential equations (ODEs) for the concentrations of all involved species, the scheme is developed using the equations of reaction trajectories, which can be viewed as a generalized gradient flow of physically relevant free energy. The unique solvability, positivity-preserving, and energy-stable properties are proved for the general case involving multiple reactions, under a mild condition on the stoichiometric matrix.
format Preprint
id arxiv_https___arxiv_org_abs_2402_03731
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle On a positive-preserving, energy-stable numerical scheme to mass-action kinetics with detailed balance
Liu, Chun
Wang, Cheng
Wang, Yiwei
Numerical Analysis
In this paper, we provide a detailed theoretical analysis of the numerical scheme introduced in J. Comput. Phys. 436 (2021) 110253 for the reaction kinetics of a class of chemical reaction networks that satisfies detailed balance condition. In contrast to conventional numerical approximations, which are typically constructed based on ordinary differential equations (ODEs) for the concentrations of all involved species, the scheme is developed using the equations of reaction trajectories, which can be viewed as a generalized gradient flow of physically relevant free energy. The unique solvability, positivity-preserving, and energy-stable properties are proved for the general case involving multiple reactions, under a mild condition on the stoichiometric matrix.
title On a positive-preserving, energy-stable numerical scheme to mass-action kinetics with detailed balance
topic Numerical Analysis
url https://arxiv.org/abs/2402.03731