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Main Authors: Zhuang, Shengxin, Tanner, John, Wu, Yusen, Huynh, Du Q., Cadet, Wei Liu Xavier F., Fontaine, Nicolas, Charton, Philippe, Damour, Cedric, Cadet, Frederic, Wang, Jingbo
Format: Preprint
Published: 2024
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Online Access:https://arxiv.org/abs/2402.03847
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author Zhuang, Shengxin
Tanner, John
Wu, Yusen
Huynh, Du Q.
Cadet, Wei Liu Xavier F.
Fontaine, Nicolas
Charton, Philippe
Damour, Cedric
Cadet, Frederic
Wang, Jingbo
author_facet Zhuang, Shengxin
Tanner, John
Wu, Yusen
Huynh, Du Q.
Cadet, Wei Liu Xavier F.
Fontaine, Nicolas
Charton, Philippe
Damour, Cedric
Cadet, Frederic
Wang, Jingbo
contents Quantum machine learning (QML) is one of the most promising applications of quantum computation. However, it is still unclear whether quantum advantages exist when the data is of a classical nature and the search for practical, real-world applications of QML remains active. In this work, we apply the well-studied quantum support vector machine (QSVM), a powerful QML model, to a binary classification task which classifies peptides as either hemolytic or non-hemolytic. Using three peptide datasets, we apply and contrast the performance of the QSVM, numerous classical SVMs, and the best published results on the same peptide classification task, out of which the QSVM performs best. The contributions of this work include (i) the first application of the QSVM to this specific peptide classification task, (ii) an explicit demonstration of QSVMs outperforming the best published results attained with classical machine learning models on this classification task and (iii) empirical results showing that the QSVM is capable of outperforming many (and possibly all) classical SVMs on this classification task. This foundational work paves the way to verifiable quantum advantages in the field of computational biology and facilitates safer therapeutic development.
format Preprint
id arxiv_https___arxiv_org_abs_2402_03847
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Non-Hemolytic Peptide Classification Using A Quantum Support Vector Machine
Zhuang, Shengxin
Tanner, John
Wu, Yusen
Huynh, Du Q.
Cadet, Wei Liu Xavier F.
Fontaine, Nicolas
Charton, Philippe
Damour, Cedric
Cadet, Frederic
Wang, Jingbo
Quantum Physics
Quantum machine learning (QML) is one of the most promising applications of quantum computation. However, it is still unclear whether quantum advantages exist when the data is of a classical nature and the search for practical, real-world applications of QML remains active. In this work, we apply the well-studied quantum support vector machine (QSVM), a powerful QML model, to a binary classification task which classifies peptides as either hemolytic or non-hemolytic. Using three peptide datasets, we apply and contrast the performance of the QSVM, numerous classical SVMs, and the best published results on the same peptide classification task, out of which the QSVM performs best. The contributions of this work include (i) the first application of the QSVM to this specific peptide classification task, (ii) an explicit demonstration of QSVMs outperforming the best published results attained with classical machine learning models on this classification task and (iii) empirical results showing that the QSVM is capable of outperforming many (and possibly all) classical SVMs on this classification task. This foundational work paves the way to verifiable quantum advantages in the field of computational biology and facilitates safer therapeutic development.
title Non-Hemolytic Peptide Classification Using A Quantum Support Vector Machine
topic Quantum Physics
url https://arxiv.org/abs/2402.03847