Characterizing the detailed balance property by means of measurements in chemical networks
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arXiv
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| Hauptverfasser: | , , |
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| Format: | Preprint |
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2024
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| _version_ | 1866909112517787648 |
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| author | Franco, Eugenia Kepka, Bernhard Velázquez, Juan J. L. |
| author_facet | Franco, Eugenia Kepka, Bernhard Velázquez, Juan J. L. |
| contents | In this paper we study how to determine if a linear biochemical network satisfies the detailed balance condition, without knowing the details of all the reactions taking place in the network. To this end, we use the formalism of response functions $R_{ij} (t) $ that measure how the system reacts to the injection of the substance $j$ at time $t=0$, by measuring the concentration of the substance $i \neq j$ for $t >0$. In particular, we obtain a condition involving two reciprocal measurements (i.e.~$R_{ij}(t), \, R_{ji}(t)$) that is necessary, but not sufficient for the detailed balance condition to hold in the network. Moreover, we prove that this necessary condition is also sufficient if a topological condition is satisfied, as well as a stability property that guarantees that the chemical rates are not fine-tuned. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2402_12935 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Characterizing the detailed balance property by means of measurements in chemical networks Franco, Eugenia Kepka, Bernhard Velázquez, Juan J. L. Mathematical Physics Dynamical Systems In this paper we study how to determine if a linear biochemical network satisfies the detailed balance condition, without knowing the details of all the reactions taking place in the network. To this end, we use the formalism of response functions $R_{ij} (t) $ that measure how the system reacts to the injection of the substance $j$ at time $t=0$, by measuring the concentration of the substance $i \neq j$ for $t >0$. In particular, we obtain a condition involving two reciprocal measurements (i.e.~$R_{ij}(t), \, R_{ji}(t)$) that is necessary, but not sufficient for the detailed balance condition to hold in the network. Moreover, we prove that this necessary condition is also sufficient if a topological condition is satisfied, as well as a stability property that guarantees that the chemical rates are not fine-tuned. |
| title | Characterizing the detailed balance property by means of measurements in chemical networks |
| topic | Mathematical Physics Dynamical Systems |
| url | https://arxiv.org/abs/2402.12935 |