Integrating Deep Learning and Synthetic Biology: A Co-Design Approach for Enhancing Gene Expression via N-terminal Coding Sequences
Fuente:
arXiv
Enregistré dans:
| Auteurs principaux: | Yan, Zhanglu, Chu, Weiran, Sheng, Yuhua, Tang, Kaiwen, Wang, Shida, Liu, Yanfeng, Wong, Weng-Fai |
|---|---|
| Format: | Preprint |
| Publié: |
2024
|
| Sujets: | |
| Accès en ligne: | |
| Tags: |
Ajouter un tag
Pas de tags, Soyez le premier à ajouter un tag!
|
Documents similaires
Sorbet: A Neuromorphic Hardware-Compatible Transformer-Based Spiking Language Model
par: Tang, Kaiwen, et autres
Publié: (2024)
par: Tang, Kaiwen, et autres
Publié: (2024)
Happy and Immersive Clustering Segmentations of Biological Co-Expression Patterns
par: Tjörnhammar, Richard
Publié: (2024)
par: Tjörnhammar, Richard
Publié: (2024)
Integrative Prognostic Modeling of Breast Cancer Survival with Gene Expression and Clinical Data
par: Amevor, Robert, et autres
Publié: (2025)
par: Amevor, Robert, et autres
Publié: (2025)
GROOT: Effective Design of Biological Sequences with Limited Experimental Data
par: Tran, Thanh V. T., et autres
Publié: (2024)
par: Tran, Thanh V. T., et autres
Publié: (2024)
Bootstrapped Training of Score-Conditioned Generator for Offline Design of Biological Sequences
par: Kim, Minsu, et autres
Publié: (2023)
par: Kim, Minsu, et autres
Publié: (2023)
WGTDA: A Topological Perspective to Biomarker Discovery in Gene Expression Data
par: Nyase, Ndivhuwo, et autres
Publié: (2024)
par: Nyase, Ndivhuwo, et autres
Publié: (2024)
The Convergence of AI and Synthetic Biology: The Looming Deluge
par: Vindman, Cindy, et autres
Publié: (2024)
par: Vindman, Cindy, et autres
Publié: (2024)
GastroDL-Fusion: A Dual-Modal Deep Learning Framework Integrating Protein-Ligand Complexes and Gene Sequences for Gastrointestinal Disease Drug Discovery
par: Gao, Ziyang, et autres
Publié: (2025)
par: Gao, Ziyang, et autres
Publié: (2025)
GoForth: Language Models for RNA Design under Structure, Sequence, and Coding Constraints
par: Lindsey, Michael
Publié: (2026)
par: Lindsey, Michael
Publié: (2026)
Reward-Guided Discrete Diffusion via Clean-Sample Markov Chain for Molecule and Biological Sequence Design
par: Phunyaphibarn, Prin, et autres
Publié: (2026)
par: Phunyaphibarn, Prin, et autres
Publié: (2026)
The Epigenetic Tapestry: A Review of DNA Methylation and Non-Coding RNA's Interplay with Genetic Threads, Weaving a Network Impacting Gene Expression and Disease Manifestations
par: He, Yu-Li, et autres
Publié: (2025)
par: He, Yu-Li, et autres
Publié: (2025)
Harnessing Diet and Gene Expression Insights through a Centralized Nutrigenomics Database to Improve Public Health
par: Hai, Fahmida, et autres
Publié: (2025)
par: Hai, Fahmida, et autres
Publié: (2025)
Assessing the Utility of Large Language Models for Phenotype-Driven Gene Prioritization in Rare Genetic Disorder Diagnosis
par: Kim, Junyoung, et autres
Publié: (2024)
par: Kim, Junyoung, et autres
Publié: (2024)
De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning
par: Li, Chen, et autres
Publié: (2024)
par: Li, Chen, et autres
Publié: (2024)
Precision Oncology: Targeting Genomic Alterations and Cancer Signaling with Integrative Multi-Omics, Deep Learning and Network Biology in Medical Oncology
par: Kumar, Manish
Publié: (2023)
par: Kumar, Manish
Publié: (2023)
Biomarker Integration and Biosensor Technologies Enabling AI-Driven Insights into Biological Aging
par: Kushner, Jared A, et autres
Publié: (2025)
par: Kushner, Jared A, et autres
Publié: (2025)
A Closed-Form Solution to the 2-Sample Problem for Quantifying Changes in Gene Expression using Bayes Factors
par: Hoerbst, Franziska, et autres
Publié: (2024)
par: Hoerbst, Franziska, et autres
Publié: (2024)
GeneFlow: Translation of Single-cell Gene Expression to Histopathological Images via Rectified Flow
par: Wang, Mengbo, et autres
Publié: (2025)
par: Wang, Mengbo, et autres
Publié: (2025)
HyperADRs: A Hierarchical Hypergraph Framework for Drug-Gene-ADR Prediction
par: Cai, Ze, et autres
Publié: (2025)
par: Cai, Ze, et autres
Publié: (2025)
Decoupled Sequence and Structure Generation for Realistic Antibody Design
par: Kim, Nayoung, et autres
Publié: (2024)
par: Kim, Nayoung, et autres
Publié: (2024)
Bioelectrical Interfaces Beyond Cellular Excitability: Cancer, Aging, and Gene Expression Reprogramming
par: Cadinu, Paolo, et autres
Publié: (2025)
par: Cadinu, Paolo, et autres
Publié: (2025)
Precision Cancer Classification and Biomarker Identification from mRNA Gene Expression via Dimensionality Reduction and Explainable AI
par: Tabassum, Farzana, et autres
Publié: (2024)
par: Tabassum, Farzana, et autres
Publié: (2024)
Integrative Adaptive Indexes from Noisy Routine Haematological Markers can Predict and Discriminate Health Status and Biological Age
par: Hernández-Orozco, Santiago, et autres
Publié: (2023)
par: Hernández-Orozco, Santiago, et autres
Publié: (2023)
BioCode: A Data-Driven Procedure to Learn the Growth of Biological Networks
par: Sefer, Emre
Publié: (2021)
par: Sefer, Emre
Publié: (2021)
Fake it till you predict it: data augmentation strategies to detect initiation and termination of oncology treatment
par: Pohyer, Valentin, et autres
Publié: (2024)
par: Pohyer, Valentin, et autres
Publié: (2024)
A clinical trial termination prediction model based on denoising autoencoder and deep survival regression
par: Huamei Qi, et autres
Publié: (2024)
par: Huamei Qi, et autres
Publié: (2024)
Pathway Tools version 28.0: Integrated Software for Pathway/Genome Informatics and Systems Biology
par: Karp, Peter D., et autres
Publié: (2015)
par: Karp, Peter D., et autres
Publié: (2015)
BioBO: Biology-informed Bayesian Optimization for Perturbation Design
par: Li, Yanke, et autres
Publié: (2025)
par: Li, Yanke, et autres
Publié: (2025)
SFM-Protein: Integrative Co-evolutionary Pre-training for Advanced Protein Sequence Representation
par: He, Liang, et autres
Publié: (2024)
par: He, Liang, et autres
Publié: (2024)
Integrating Biological-Informed Recurrent Neural Networks for Glucose-Insulin Dynamics Modeling
par: De Carli, Stefano, et autres
Publié: (2025)
par: De Carli, Stefano, et autres
Publié: (2025)
Synthetic MC via Biological Transmitters: Therapeutic Modulation of the Gut-Brain Axis
par: Lotter, Sebastian, et autres
Publié: (2025)
par: Lotter, Sebastian, et autres
Publié: (2025)
SparrowSNN: A Hardware/software Co-design for Energy Efficient ECG Classification
par: Yan, Zhanglu, et autres
Publié: (2024)
par: Yan, Zhanglu, et autres
Publié: (2024)
Scalable Agentic Reasoning for Designing Biologics Targeting Intrinsically Disordered Proteins
par: Sinclair, Matthew, et autres
Publié: (2025)
par: Sinclair, Matthew, et autres
Publié: (2025)
CHRep: Cross-modal Histology Representation and Post-hoc Calibration for Spatial Gene Expression Prediction
par: Wang, Changfan, et autres
Publié: (2026)
par: Wang, Changfan, et autres
Publié: (2026)
Mapping Whole Exome Sequencing to In Vivo Imaging with Stereotactic Localization and Deep Learning
par: Servati, Mahsa, et autres
Publié: (2024)
par: Servati, Mahsa, et autres
Publié: (2024)
FluxGAT: Integrating Flux Sampling with Graph Neural Networks for Unbiased Gene Essentiality Classification
par: Sharma, Kieren, et autres
Publié: (2024)
par: Sharma, Kieren, et autres
Publié: (2024)
Bayesian Re-Analysis of the Phylogenetic Topology of Early SARS-CoV-2 Case Sequences
par: Weissman, Michael B.
Publié: (2025)
par: Weissman, Michael B.
Publié: (2025)
DeepProtein: Deep Learning Library and Benchmark for Protein Sequence Learning
par: Xie, Jiaqing, et autres
Publié: (2024)
par: Xie, Jiaqing, et autres
Publié: (2024)
Reconsidering the energy efficiency of spiking neural networks
par: Yan, Zhanglu, et autres
Publié: (2024)
par: Yan, Zhanglu, et autres
Publié: (2024)
Can Large Language Models Design Biological Weapons? Evaluating Moremi Bio
par: Hattoh, Gertrude, et autres
Publié: (2025)
par: Hattoh, Gertrude, et autres
Publié: (2025)
Documents similaires
-
Sorbet: A Neuromorphic Hardware-Compatible Transformer-Based Spiking Language Model
par: Tang, Kaiwen, et autres
Publié: (2024) -
Happy and Immersive Clustering Segmentations of Biological Co-Expression Patterns
par: Tjörnhammar, Richard
Publié: (2024) -
Integrative Prognostic Modeling of Breast Cancer Survival with Gene Expression and Clinical Data
par: Amevor, Robert, et autres
Publié: (2025) -
GROOT: Effective Design of Biological Sequences with Limited Experimental Data
par: Tran, Thanh V. T., et autres
Publié: (2024) -
Bootstrapped Training of Score-Conditioned Generator for Offline Design of Biological Sequences
par: Kim, Minsu, et autres
Publié: (2023)