Exact and efficient phylodynamic simulation from arbitrarily large populations
Fuente:
arXiv
Saved in:
| Main Authors: | Celentano, Michael, DeWitt, William S., Prillo, Sebastian, Song, Yun S. |
|---|---|
| Format: | Preprint |
| Published: |
2024
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
First two moments and cross-moments of some coalescent times of the pure birth tree
by: Bartoszek, Krzysztof, et al.
Published: (2025)
by: Bartoszek, Krzysztof, et al.
Published: (2025)
Bounds for survival probabilities in supercritical Galton-Watson processes and applications to population genetics
by: Bürger, Reinhard
Published: (2025)
by: Bürger, Reinhard
Published: (2025)
Two waves of adaptation: speciation induced by dormancy in a model with changing environment
by: Cordero, Fernando, et al.
Published: (2024)
by: Cordero, Fernando, et al.
Published: (2024)
The Effect of Assortativity on Mpox Spreading with Two Core Groups
by: Nedényi, Fanni, et al.
Published: (2025)
by: Nedényi, Fanni, et al.
Published: (2025)
The Accumulation of Beneficial Mutations and Convergence to a Poisson Process
by: Udomchatpitak, Nantawat, et al.
Published: (2024)
by: Udomchatpitak, Nantawat, et al.
Published: (2024)
Genetic Composition of Supercritical Branching Populations under Power Law Mutation Rates
by: Brouard, Vianney
Published: (2023)
by: Brouard, Vianney
Published: (2023)
A general multi-scale description of metastable adaptive motion across fitness valleys
by: Esser, Manuel, et al.
Published: (2021)
by: Esser, Manuel, et al.
Published: (2021)
Effective growth rates in a periodically changing environment: From mutation to invasion
by: Esser, Manuel, et al.
Published: (2023)
by: Esser, Manuel, et al.
Published: (2023)
Gene genealogies in diploid populations evolving according to sweepstakes reproduction
by: Eldon, Bjarki
Published: (2026)
by: Eldon, Bjarki
Published: (2026)
Growth Models Under Uniform Catastrophes
by: Amaya, Joan, et al.
Published: (2026)
by: Amaya, Joan, et al.
Published: (2026)
Ages, sizes and (trees within) trees of taxa and of urns, from Yule to today
by: Lambert, Amaury
Published: (2024)
by: Lambert, Amaury
Published: (2024)
Limit theorems for the site frequency spectrum of neutral mutations in an exponentially growing population
by: Gunnarsson, Einar Bjarki, et al.
Published: (2023)
by: Gunnarsson, Einar Bjarki, et al.
Published: (2023)
Bernstein duality revisited: frequency-dependent selection, coordinated mutation and opposing environments
by: Cordero, Fernando, et al.
Published: (2024)
by: Cordero, Fernando, et al.
Published: (2024)
The mutation process on the ancestral line under selection
by: Baake, Ellen, et al.
Published: (2023)
by: Baake, Ellen, et al.
Published: (2023)
Labelled partitions in action: recombination, selection, mutation, and more
by: Alberti, Frederic
Published: (2022)
by: Alberti, Frederic
Published: (2022)
Asymptotic sampling distributions made easy: loose linkage in the ancestral recombination graph
by: Alberti, Frederic
Published: (2023)
by: Alberti, Frederic
Published: (2023)
Evolving genealogies in cultural evolution, the descendant process, and the number of cultural traits
by: Wakano, Joe Yuichiro, et al.
Published: (2025)
by: Wakano, Joe Yuichiro, et al.
Published: (2025)
Catastrophe-dispersion models in random and varying environments across generations
by: de Lima, Lucas R., et al.
Published: (2026)
by: de Lima, Lucas R., et al.
Published: (2026)
Muller's ratchet in a near-critical regime: tournament versus fitness proportional selection
by: Igelbrink, Jan Lukas, et al.
Published: (2023)
by: Igelbrink, Jan Lukas, et al.
Published: (2023)
Embedding of Markov matrices for $d\leqslant 4$
by: Baake, Michael, et al.
Published: (2023)
by: Baake, Michael, et al.
Published: (2023)
Stochastic Epidemic Models with Partial Information
by: Kamkumo, Florent Ouabo, et al.
Published: (2025)
by: Kamkumo, Florent Ouabo, et al.
Published: (2025)
Looking forwards and backwards: dynamics and genealogies of locally regulated populations
by: Etheridge, Alison M., et al.
Published: (2023)
by: Etheridge, Alison M., et al.
Published: (2023)
Addendum to: Bounds for survival probabilities in supercritical Galton-Watson processes and applications to population genetics
by: Bürger, Reinhard
Published: (2026)
by: Bürger, Reinhard
Published: (2026)
Phenotypic heterogeneity in temporally fluctuating environments
by: Browning, Alexander P, et al.
Published: (2024)
by: Browning, Alexander P, et al.
Published: (2024)
Stochastic two-patch epidemic model with nonlinear recidivism
by: Calvo, Juan G., et al.
Published: (2024)
by: Calvo, Juan G., et al.
Published: (2024)
Dynamical compatibility for finite and infinite population models used in genetics
by: Chalub, Fabio A. C. C., et al.
Published: (2025)
by: Chalub, Fabio A. C. C., et al.
Published: (2025)
Re-examining aggregation in the Tallis-Leyton model of parasite acquisition
by: McVinish, R.
Published: (2024)
by: McVinish, R.
Published: (2024)
Neutral Diversity in Experimental Metapopulations
by: Doulcier, Guilhem, et al.
Published: (2023)
by: Doulcier, Guilhem, et al.
Published: (2023)
A stochastic field theory for the evolution of quantitative traits in finite populations
by: Bhat, Ananda Shikhara
Published: (2024)
by: Bhat, Ananda Shikhara
Published: (2024)
On a stochastic epidemic SIR model with non homogenous population: a toy model for HIV
by: Rovira, Carles
Published: (2025)
by: Rovira, Carles
Published: (2025)
Mathematically tractable models of random phylogenetic networks: an overview of some recent developments
by: Bienvenu, François
Published: (2024)
by: Bienvenu, François
Published: (2024)
Modelling the spread of two successive SIR epidemics on a configuration model network
by: Ball, Frank, et al.
Published: (2024)
by: Ball, Frank, et al.
Published: (2024)
The tournament ratchet's clicktime process, and metastability in a Moran model
by: Igelbrink, Jan Lukas, et al.
Published: (2025)
by: Igelbrink, Jan Lukas, et al.
Published: (2025)
Sampling probabilities, diffusions, ancestral graphs, and duality under strong selection
by: Favero, Martina, et al.
Published: (2023)
by: Favero, Martina, et al.
Published: (2023)
On a Neutral Host-Virus Model with Recombination
by: Eichhorn, Raphael, et al.
Published: (2025)
by: Eichhorn, Raphael, et al.
Published: (2025)
Stochastic Models and Estimation of Undetected Infections in the Transmission of Zika Virus
by: Oluoch, Lillian Achola, et al.
Published: (2025)
by: Oluoch, Lillian Achola, et al.
Published: (2025)
Evolution of a trait distributed over a large fragmented population: Propagation of chaos meets adaptive dynamics
by: Lambert, Amaury, et al.
Published: (2025)
by: Lambert, Amaury, et al.
Published: (2025)
Inferring birth versus death dynamics for ecological interactions in stochastic heterogeneous populations
by: Beckman, Erin, et al.
Published: (2024)
by: Beckman, Erin, et al.
Published: (2024)
Using multi-delay discrete delay differential equations to accurately simulate models with distributed delays
by: Cassidy, Tyler
Published: (2024)
by: Cassidy, Tyler
Published: (2024)
Bernoulli factories and duality in Wright-Fisher and Allen-Cahn models of population genetics
by: Koskela, Jere, et al.
Published: (2023)
by: Koskela, Jere, et al.
Published: (2023)
Similar Items
-
First two moments and cross-moments of some coalescent times of the pure birth tree
by: Bartoszek, Krzysztof, et al.
Published: (2025) -
Bounds for survival probabilities in supercritical Galton-Watson processes and applications to population genetics
by: Bürger, Reinhard
Published: (2025) -
Two waves of adaptation: speciation induced by dormancy in a model with changing environment
by: Cordero, Fernando, et al.
Published: (2024) -
The Effect of Assortativity on Mpox Spreading with Two Core Groups
by: Nedényi, Fanni, et al.
Published: (2025) -
The Accumulation of Beneficial Mutations and Convergence to a Poisson Process
by: Udomchatpitak, Nantawat, et al.
Published: (2024)