FlowCyt: A Comparative Study of Deep Learning Approaches for Multi-Class Classification in Flow Cytometry Benchmarking
Fuente:
arXiv
Saved in:
| Main Authors: | Bini, Lorenzo, Mojarrad, Fatemeh Nassajian, Liarou, Margarita, Matthes, Thomas, Marchand-Maillet, Stéphane |
|---|---|
| Format: | Preprint |
| Published: |
2024
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Injecting Hierarchical Biological Priors into Graph Neural Networks for Flow Cytometry Prediction
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024)
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024)
HemaGraph: Breaking Barriers in Hematologic Single Cell Classification with Graph Attention
by: Bini, Lorenzo, et al.
Published: (2024)
by: Bini, Lorenzo, et al.
Published: (2024)
TimeFlow : A Density‐Driven Pseudotime Method for Flow Cytometry Data Analysis
by: Margarita Liarou, et al.
Published: (2025)
by: Margarita Liarou, et al.
Published: (2025)
TimeFlow 2: An Unsupervised Cell Lineage Detection Method for Flow Cytometry Data
by: Margarita Liarou, et al.
Published: (2026)
by: Margarita Liarou, et al.
Published: (2026)
Why Attention Graphs Are All We Need: Pioneering Hierarchical Classification of Hematologic Cell Populations with LeukoGraph
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024)
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024)
Per-event Uncertainty Quantification for Flow Cytometry using Calibration Beads
by: Bedekar, Prajakta, et al.
Published: (2024)
by: Bedekar, Prajakta, et al.
Published: (2024)
GatingTree: Pathfinding Analysis of Group-Specific Effects in Cytometry Data
by: Ono, Masahiro
Published: (2024)
by: Ono, Masahiro
Published: (2024)
Deep Clustering for Blood Cell Classification and Quantification
by: Macarie-Ancau, Mihaela, et al.
Published: (2025)
by: Macarie-Ancau, Mihaela, et al.
Published: (2025)
Flow Rate Independent Multiscale Liquid Biopsy for Precision Oncology
by: Yan, Jing, et al.
Published: (2022)
by: Yan, Jing, et al.
Published: (2022)
Novel Methods for Analyzing Cellular Interactions in Deep Learning-Based Image Cytometry: Spatial Interaction Potential and Co-Localization Index
by: Nagasaka, Toru, et al.
Published: (2024)
by: Nagasaka, Toru, et al.
Published: (2024)
Handling Class Imbalance Problem in Skin Lesion Classification: Finding Strengths and Weaknesses of Various Balancing Techniques
by: Khandaker, Ariful Islam, et al.
Published: (2025)
by: Khandaker, Ariful Islam, et al.
Published: (2025)
Brain Networks Flow-Topology via Variance Minimization in the Wasserstein Space
by: Dakurah, Sixtus
Published: (2025)
by: Dakurah, Sixtus
Published: (2025)
ET-Flow: Equivariant Flow-Matching for Molecular Conformer Generation
by: Hassan, Majdi, et al.
Published: (2024)
by: Hassan, Majdi, et al.
Published: (2024)
Sleep Apnea Detection on a Wireless Multimodal Wearable Device Without Oxygen Flow Using a Mamba-based Deep Learning Approach
by: Luszczynski, Dominik, et al.
Published: (2025)
by: Luszczynski, Dominik, et al.
Published: (2025)
TockyPrep: Data Preprocessing Methods for Flow Cytometric Fluorescent Timer Analysis
by: Ono, Masahiro
Published: (2024)
by: Ono, Masahiro
Published: (2024)
TockyLocus: Quantitative Analysis Methods for Flow Cytometric Fluorescent Timer Data
by: Ono, Masahiro
Published: (2024)
by: Ono, Masahiro
Published: (2024)
Beyond Bayesian Inference: The Correlation Integral Likelihood Framework and Gradient Flow Methods for Deterministic Sampling
by: Gwiazda, Piotr, et al.
Published: (2025)
by: Gwiazda, Piotr, et al.
Published: (2025)
Flow Matching for Count Data
by: Wei, Ganchao, et al.
Published: (2026)
by: Wei, Ganchao, et al.
Published: (2026)
Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design
by: Campbell, Andrew, et al.
Published: (2024)
by: Campbell, Andrew, et al.
Published: (2024)
Benchmarking Class Activation Map Methods for Explainable Brain Hemorrhage Classification on Hemorica Dataset
by: Rafati, Z., et al.
Published: (2025)
by: Rafati, Z., et al.
Published: (2025)
Deep Multi-modal Breast Cancer Detection Network
by: Shah, Noor Ul Huda, et al.
Published: (2025)
by: Shah, Noor Ul Huda, et al.
Published: (2025)
CAFA-evaluator: A Python Tool for Benchmarking Ontological Classification Methods
by: Piovesan, Damiano, et al.
Published: (2023)
by: Piovesan, Damiano, et al.
Published: (2023)
Conformation Generation using Transformer Flows
by: Shah, Sohil Atul, et al.
Published: (2024)
by: Shah, Sohil Atul, et al.
Published: (2024)
Sub-Clustering for Class Distance Recalculation in Long-Tailed Drug Classification
by: Su, Yujia, et al.
Published: (2025)
by: Su, Yujia, et al.
Published: (2025)
Deformable Registration of MRA and 4D Flow Images to Facilitate Accurate Estimation of Flow Properties within Blood Vessels
by: Lior, Dan, et al.
Published: (2023)
by: Lior, Dan, et al.
Published: (2023)
Flow-Matching Based Refiner for Molecular Conformer Generation
by: Xu, Xiangyang, et al.
Published: (2025)
by: Xu, Xiangyang, et al.
Published: (2025)
Modeling Microenvironment Trajectories on Spatial Transcriptomics with NicheFlow
by: Sakalyan, Kristiyan, et al.
Published: (2025)
by: Sakalyan, Kristiyan, et al.
Published: (2025)
Spatially-extended Flow Phixer (SpeF-Phixer): A Spatially Extended $φ$-Mixing Framework for Gene Regulatory Causal Inference in Spatial Gene Field
by: Nagasaka, Toru, et al.
Published: (2025)
by: Nagasaka, Toru, et al.
Published: (2025)
Donor-Aware scRNA-seq Benchmarks for IBD Classification
by: Muhire, Jonathan
Published: (2026)
by: Muhire, Jonathan
Published: (2026)
Comparing Bayesian and Frequentist Inference in Biological Models: A Comparative Analysis of Accuracy, Uncertainty, and Identifiability
by: Mohammed, Mohammed A. Y., et al.
Published: (2025)
by: Mohammed, Mohammed A. Y., et al.
Published: (2025)
Repurposing Protein Language Models for Latent Flow-Based Fitness Optimization
by: Arroyo, Amaru Caceres, et al.
Published: (2026)
by: Arroyo, Amaru Caceres, et al.
Published: (2026)
Protein Fold Classification at Scale: Benchmarking and Pretraining
by: Chen, Dexiong, et al.
Published: (2026)
by: Chen, Dexiong, et al.
Published: (2026)
AntibodyFlow: Normalizing Flow Model for Designing Antibody Complementarity-Determining Regions
by: Xu, Bohao, et al.
Published: (2024)
by: Xu, Bohao, et al.
Published: (2024)
Fake it till you predict it: data augmentation strategies to detect initiation and termination of oncology treatment
by: Pohyer, Valentin, et al.
Published: (2024)
by: Pohyer, Valentin, et al.
Published: (2024)
Explainable Machine Learning and Deep Learning Models for Predicting TAS2R-Bitter Molecule Interactions
by: Ferri, Francesco, et al.
Published: (2024)
by: Ferri, Francesco, et al.
Published: (2024)
Quantification of Information Flow by Dual Reporter System and Its Application to Bacterial Chemotaxis
by: Nakamura, Kento, et al.
Published: (2025)
by: Nakamura, Kento, et al.
Published: (2025)
MolGuidance: Advanced Guidance Strategies for Conditional Molecular Generation with Flow Matching
by: Jin, Jirui, et al.
Published: (2025)
by: Jin, Jirui, et al.
Published: (2025)
An Open-Source, Open Data Approach to Activity Classification from Triaxial Accelerometry in an Ambulatory Setting
by: Nikookar, Sepideh, et al.
Published: (2026)
by: Nikookar, Sepideh, et al.
Published: (2026)
Quantum Variational Transformer Model for Enhanced Cancer Classification
by: Roosan, Don, et al.
Published: (2025)
by: Roosan, Don, et al.
Published: (2025)
scDFM: Distributional Flow Matching Model for Robust Single-Cell Perturbation Prediction
by: Yu, Chenglei, et al.
Published: (2026)
by: Yu, Chenglei, et al.
Published: (2026)
Similar Items
-
Injecting Hierarchical Biological Priors into Graph Neural Networks for Flow Cytometry Prediction
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024) -
HemaGraph: Breaking Barriers in Hematologic Single Cell Classification with Graph Attention
by: Bini, Lorenzo, et al.
Published: (2024) -
TimeFlow : A Density‐Driven Pseudotime Method for Flow Cytometry Data Analysis
by: Margarita Liarou, et al.
Published: (2025) -
TimeFlow 2: An Unsupervised Cell Lineage Detection Method for Flow Cytometry Data
by: Margarita Liarou, et al.
Published: (2026) -
Why Attention Graphs Are All We Need: Pioneering Hierarchical Classification of Hematologic Cell Populations with LeukoGraph
by: Mojarrad, Fatemeh Nassajian, et al.
Published: (2024)