Representing Molecules as Random Walks Over Interpretable Grammars
Fuente:
arXiv
Guardado en:
| Autores principales: | Sun, Michael, Guo, Minghao, Yuan, Weize, Thost, Veronika, Owens, Crystal Elaine, Grosz, Aristotle Franklin, Selvan, Sharvaa, Zhou, Katelyn, Mohiuddin, Hassan, Pedretti, Benjamin J, Smith, Zachary P, Chen, Jie, Matusik, Wojciech |
|---|---|
| Formato: | Preprint |
| Publicado: |
2024
|
| Materias: | |
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
Procedural Synthesis of Synthesizable Molecules
por: Sun, Michael, et al.
Publicado: (2024)
por: Sun, Michael, et al.
Publicado: (2024)
Physically Valid Biomolecular Interaction Modeling with Gauss-Seidel Projection
por: Chen, Siyuan, et al.
Publicado: (2025)
por: Chen, Siyuan, et al.
Publicado: (2025)
Two-Stage Pretraining for Molecular Property Prediction in the Wild
por: Wijaya, Kevin Tirta, et al.
Publicado: (2024)
por: Wijaya, Kevin Tirta, et al.
Publicado: (2024)
Multimodal Large Language Models for Inverse Molecular Design with Retrosynthetic Planning
por: Liu, Gang, et al.
Publicado: (2024)
por: Liu, Gang, et al.
Publicado: (2024)
Implicitly and Differentiably Representing Protein Surfaces and Interfaces
por: Scott, Cory B., et al.
Publicado: (2025)
por: Scott, Cory B., et al.
Publicado: (2025)
MAP Format for Representing Chemical Modifications, Annotations, and Mutations in Protein Sequences: An Extension of the FASTA Format
por: Shendre, Akshay, et al.
Publicado: (2025)
por: Shendre, Akshay, et al.
Publicado: (2025)
PlayMolecule Viewer: a toolkit for the visualization of molecules and other data
por: Torrens-Fontanals, Mariona, et al.
Publicado: (2023)
por: Torrens-Fontanals, Mariona, et al.
Publicado: (2023)
Fragment and Geometry Aware Tokenization of Molecules for Structure-Based Drug Design Using Language Models
por: Fu, Cong, et al.
Publicado: (2024)
por: Fu, Cong, et al.
Publicado: (2024)
Protein Discovery with Discrete Walk-Jump Sampling
por: Frey, Nathan C., et al.
Publicado: (2023)
por: Frey, Nathan C., et al.
Publicado: (2023)
Representing local protein environments with machine learning force fields
por: Bojan, Meital, et al.
Publicado: (2025)
por: Bojan, Meital, et al.
Publicado: (2025)
Molecule Design by Latent Prompt Transformer
por: Kong, Deqian, et al.
Publicado: (2023)
por: Kong, Deqian, et al.
Publicado: (2023)
Molecule Design by Latent Prompt Transformer
por: Kong, Deqian, et al.
Publicado: (2024)
por: Kong, Deqian, et al.
Publicado: (2024)
Molecular Fingerprints Are Strong Models for Peptide Function Prediction
por: Adamczyk, Jakub, et al.
Publicado: (2025)
por: Adamczyk, Jakub, et al.
Publicado: (2025)
MUDiff: Unified Diffusion for Complete Molecule Generation
por: Hua, Chenqing, et al.
Publicado: (2023)
por: Hua, Chenqing, et al.
Publicado: (2023)
Benchmarking Large Language Models for Molecule Prediction Tasks
por: Zhong, Zhiqiang, et al.
Publicado: (2024)
por: Zhong, Zhiqiang, et al.
Publicado: (2024)
Membrane Interactions in Alzheimer`s Treatment Strategies with Multitarget Molecules
por: Zambrano, Pablo
Publicado: (2024)
por: Zambrano, Pablo
Publicado: (2024)
Tokenizing 3D Molecule Structure with Quantized Spherical Coordinates
por: Gao, Kaiyuan, et al.
Publicado: (2024)
por: Gao, Kaiyuan, et al.
Publicado: (2024)
Scaling Structure Aware Virtual Screening to Billions of Molecules with SPRINT
por: McNutt, Andrew T., et al.
Publicado: (2024)
por: McNutt, Andrew T., et al.
Publicado: (2024)
Cell Morphology-Guided Small Molecule Generation with GFlowNets
por: Lu, Stephen Zhewen, et al.
Publicado: (2024)
por: Lu, Stephen Zhewen, et al.
Publicado: (2024)
Attention Based Molecule Generation via Hierarchical Variational Autoencoder
por: Sivanesan, Divahar
Publicado: (2024)
por: Sivanesan, Divahar
Publicado: (2024)
GeomCLIP: Contrastive Geometry-Text Pre-training for Molecules
por: Xiao, Teng, et al.
Publicado: (2024)
por: Xiao, Teng, et al.
Publicado: (2024)
RiboPO: Preference Optimization for Structure- and Stability-Aware RNA Design
por: Sun, Minghao, et al.
Publicado: (2025)
por: Sun, Minghao, et al.
Publicado: (2025)
MoleculeQA: A Dataset to Evaluate Factual Accuracy in Molecular Comprehension
por: Lu, Xingyu, et al.
Publicado: (2024)
por: Lu, Xingyu, et al.
Publicado: (2024)
MolPIF: A Parameter Interpolation Flow Model for Molecule Generation
por: Jin, Yaowei, et al.
Publicado: (2025)
por: Jin, Yaowei, et al.
Publicado: (2025)
Lift Your Molecules: Molecular Graph Generation in Latent Euclidean Space
por: Ketata, Mohamed Amine, et al.
Publicado: (2024)
por: Ketata, Mohamed Amine, et al.
Publicado: (2024)
SynFlowNet: Design of Diverse and Novel Molecules with Synthesis Constraints
por: Cretu, Miruna, et al.
Publicado: (2024)
por: Cretu, Miruna, et al.
Publicado: (2024)
Preference Optimization for Molecule Synthesis with Conditional Residual Energy-based Models
por: Liu, Songtao, et al.
Publicado: (2024)
por: Liu, Songtao, et al.
Publicado: (2024)
Functional-Group-Based Diffusion for Pocket-Specific Molecule Generation and Elaboration
por: Lin, Haitao, et al.
Publicado: (2023)
por: Lin, Haitao, et al.
Publicado: (2023)
Bridging Text and Molecule: A Survey on Multimodal Frameworks for Molecule
por: Xiao, Yi, et al.
Publicado: (2024)
por: Xiao, Yi, et al.
Publicado: (2024)
Any-Property-Conditional Molecule Generation with Self-Criticism using Spanning Trees
por: Jolicoeur-Martineau, Alexia, et al.
Publicado: (2024)
por: Jolicoeur-Martineau, Alexia, et al.
Publicado: (2024)
Exploring Discrete Flow Matching for 3D De Novo Molecule Generation
por: Dunn, Ian, et al.
Publicado: (2024)
por: Dunn, Ian, et al.
Publicado: (2024)
FREED++: Improving RL Agents for Fragment-Based Molecule Generation by Thorough Reproduction
por: Telepov, Alexander, et al.
Publicado: (2024)
por: Telepov, Alexander, et al.
Publicado: (2024)
DiffBP: Generative Diffusion of 3D Molecules for Target Protein Binding
por: Lin, Haitao, et al.
Publicado: (2022)
por: Lin, Haitao, et al.
Publicado: (2022)
Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks
por: Qiu, Keyue, et al.
Publicado: (2024)
por: Qiu, Keyue, et al.
Publicado: (2024)
A Review on Fragment-based De Novo 2D Molecule Generation
por: Voloboev, Sergei
Publicado: (2024)
por: Voloboev, Sergei
Publicado: (2024)
Symphony: Symmetry-Equivariant Point-Centered Spherical Harmonics for 3D Molecule Generation
por: Daigavane, Ameya, et al.
Publicado: (2023)
por: Daigavane, Ameya, et al.
Publicado: (2023)
S-MolSearch: 3D Semi-supervised Contrastive Learning for Bioactive Molecule Search
por: Zhou, Gengmo, et al.
Publicado: (2024)
por: Zhou, Gengmo, et al.
Publicado: (2024)
Mixed Continuous and Categorical Flow Matching for 3D De Novo Molecule Generation
por: Dunn, Ian, et al.
Publicado: (2024)
por: Dunn, Ian, et al.
Publicado: (2024)
MolTextNet: A Two-Million Molecule-Text Dataset for Multimodal Molecular Learning
por: Zhu, Yihan, et al.
Publicado: (2025)
por: Zhu, Yihan, et al.
Publicado: (2025)
Graph-structured Small Molecule Drug Discovery Through Deep Learning: Progress, Challenges, and Opportunities
por: Li, Kun, et al.
Publicado: (2025)
por: Li, Kun, et al.
Publicado: (2025)
Ejemplares similares
-
Procedural Synthesis of Synthesizable Molecules
por: Sun, Michael, et al.
Publicado: (2024) -
Physically Valid Biomolecular Interaction Modeling with Gauss-Seidel Projection
por: Chen, Siyuan, et al.
Publicado: (2025) -
Two-Stage Pretraining for Molecular Property Prediction in the Wild
por: Wijaya, Kevin Tirta, et al.
Publicado: (2024) -
Multimodal Large Language Models for Inverse Molecular Design with Retrosynthetic Planning
por: Liu, Gang, et al.
Publicado: (2024) -
Implicitly and Differentiably Representing Protein Surfaces and Interfaces
por: Scott, Cory B., et al.
Publicado: (2025)