Two fitness inference schemes compared using allele frequencies from 1,068,391 sequences sampled in the UK during the COVID-19 pandemic
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arXiv
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| Main Authors: | Zeng, Hong-Li, Yang, Cheng-Long, Jing, Bo, Barton, John, Aurell, Erik |
|---|---|
| Format: | Preprint |
| Published: |
2024
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| Subjects: | |
| Online Access: | |
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