Integrated path stability selection

Fuente: arXiv
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Hauptverfasser: Melikechi, Omar, Miller, Jeffrey W.
Format: Preprint
Veröffentlicht: 2024
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author Melikechi, Omar
Miller, Jeffrey W.
author_facet Melikechi, Omar
Miller, Jeffrey W.
contents Stability selection is a popular method for improving feature selection algorithms. One of its key attributes is that it provides theoretical upper bounds on the expected number of false positives, E(FP), enabling false positive control in practice. However, stability selection often selects few features because existing bounds on E(FP) are relatively loose. In this paper, we introduce a novel approach to stability selection based on integrating stability paths rather than maximizing over them. This yields upper bounds on E(FP) that are much stronger than previous bounds, leading to significantly more true positives in practice for the same target E(FP). Furthermore, our method requires no more computation than the original stability selection algorithm. We demonstrate the method on simulations and real data from two cancer studies.
format Preprint
id arxiv_https___arxiv_org_abs_2403_15877
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Integrated path stability selection
Melikechi, Omar
Miller, Jeffrey W.
Methodology
Machine Learning
Stability selection is a popular method for improving feature selection algorithms. One of its key attributes is that it provides theoretical upper bounds on the expected number of false positives, E(FP), enabling false positive control in practice. However, stability selection often selects few features because existing bounds on E(FP) are relatively loose. In this paper, we introduce a novel approach to stability selection based on integrating stability paths rather than maximizing over them. This yields upper bounds on E(FP) that are much stronger than previous bounds, leading to significantly more true positives in practice for the same target E(FP). Furthermore, our method requires no more computation than the original stability selection algorithm. We demonstrate the method on simulations and real data from two cancer studies.
title Integrated path stability selection
topic Methodology
Machine Learning
url https://arxiv.org/abs/2403.15877