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| Main Authors: | , |
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| Format: | Preprint |
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2024
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| Subjects: | |
| Online Access: | https://arxiv.org/abs/2403.19047 |
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| _version_ | 1866929293813088256 |
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| author | Sakref, Yann Rivoire, Olivier |
| author_facet | Sakref, Yann Rivoire, Olivier |
| contents | The apparent difficulty of designing simple autocatalysts that grow exponentially in the absence of enzymes, external drives or ingenious internal mechanisms severely constrains scenarios for the emergence of evolution by natural selection in chemical and physical systems. Here, we systematically analyze these difficulties in the context of one of the simplest and most generic autocatalysts: a dimeric molecule that duplicates by templated ligation. We show that despite its simplicity, such an autocatalyst can achieve exponential growth autonomously. This only requires that the rate of the spontaneous dimerization, the interactions between molecules, and the concentrations of substrates and products are in appropriate ranges. We also show, however, that it is possible to design as simple sub-exponential autocatalysts that have an advantage over exponential autocatalysts when competing for a common resource. We reach these conclusions by developing a general theoretical framework based on kinetic barrier diagrams. Besides challenging commonly accepted assumptions in the field of the origin of life, our results provide a blueprint for the experimental realization of elementary autocatalysts exhibiting a form of natural selection, whether on a molecular or colloidal scale. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2403_19047 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Design principles, growth laws, and competition of minimal autocatalysts Sakref, Yann Rivoire, Olivier Biomolecules The apparent difficulty of designing simple autocatalysts that grow exponentially in the absence of enzymes, external drives or ingenious internal mechanisms severely constrains scenarios for the emergence of evolution by natural selection in chemical and physical systems. Here, we systematically analyze these difficulties in the context of one of the simplest and most generic autocatalysts: a dimeric molecule that duplicates by templated ligation. We show that despite its simplicity, such an autocatalyst can achieve exponential growth autonomously. This only requires that the rate of the spontaneous dimerization, the interactions between molecules, and the concentrations of substrates and products are in appropriate ranges. We also show, however, that it is possible to design as simple sub-exponential autocatalysts that have an advantage over exponential autocatalysts when competing for a common resource. We reach these conclusions by developing a general theoretical framework based on kinetic barrier diagrams. Besides challenging commonly accepted assumptions in the field of the origin of life, our results provide a blueprint for the experimental realization of elementary autocatalysts exhibiting a form of natural selection, whether on a molecular or colloidal scale. |
| title | Design principles, growth laws, and competition of minimal autocatalysts |
| topic | Biomolecules |
| url | https://arxiv.org/abs/2403.19047 |