A Bird-Eye view on DNA Storage Simulators

Fuente: arXiv
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Auteurs principaux: Doshi, Sanket, Gohel, Mihir, Gupta, Manish K.
Format: Preprint
Publié: 2024
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author Doshi, Sanket
Gohel, Mihir
Gupta, Manish K.
author_facet Doshi, Sanket
Gohel, Mihir
Gupta, Manish K.
contents In the current world due to the huge demand for storage, DNA-based storage solution sounds quite promising because of their longevity, low power consumption, and high capacity. However in real life storing data in the form of DNA is quite expensive, and challenging. Therefore researchers and developers develop such kind of software that helps simulate real-life DNA storage without worrying about the cost. This paper aims to review some of the software that performs DNA storage simulations in different domains. The paper also explains the core concepts such as synthesis, sequencing, clustering, reconstruction, GC window, K-mer window, etc and some overview on existing algorithms. Further, we present 3 different softwares on the basis of domain, implementation techniques, and customer/commercial usability.
format Preprint
id arxiv_https___arxiv_org_abs_2404_04877
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle A Bird-Eye view on DNA Storage Simulators
Doshi, Sanket
Gohel, Mihir
Gupta, Manish K.
Information Theory
Computers and Society
Emerging Technologies
In the current world due to the huge demand for storage, DNA-based storage solution sounds quite promising because of their longevity, low power consumption, and high capacity. However in real life storing data in the form of DNA is quite expensive, and challenging. Therefore researchers and developers develop such kind of software that helps simulate real-life DNA storage without worrying about the cost. This paper aims to review some of the software that performs DNA storage simulations in different domains. The paper also explains the core concepts such as synthesis, sequencing, clustering, reconstruction, GC window, K-mer window, etc and some overview on existing algorithms. Further, we present 3 different softwares on the basis of domain, implementation techniques, and customer/commercial usability.
title A Bird-Eye view on DNA Storage Simulators
topic Information Theory
Computers and Society
Emerging Technologies
url https://arxiv.org/abs/2404.04877