Deep Learning Method for Computing Committor Functions with Adaptive Sampling
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arXiv
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| Auteurs principaux: | , |
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| Format: | Preprint |
| Publié: |
2024
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| _version_ | 1866929307491762176 |
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| author | Lin, Bo Ren, Weiqing |
| author_facet | Lin, Bo Ren, Weiqing |
| contents | The committor function is a central object for quantifying the transitions between metastable states of dynamical systems. Recently, a number of computational methods based on deep neural networks have been developed for computing the high-dimensional committor function. The success of the methods relies on sampling adequate data for the transition, which still is a challenging task for complex systems at low temperatures. In this work, we propose a deep learning method with two novel adaptive sampling schemes (I and II). In the two schemes, the data are generated actively with a modified potential where the bias potential is constructed from the learned committor function. We theoretically demonstrate the advantages of the sampling schemes and show that the data in sampling scheme II are uniformly distributed along the transition tube. This makes a promising method for studying the transition of complex systems. The efficiency of the method is illustrated in high-dimensional systems including the alanine dipeptide and a solvated dimer system. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2404_06206 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Deep Learning Method for Computing Committor Functions with Adaptive Sampling Lin, Bo Ren, Weiqing Computational Physics Machine Learning Numerical Analysis The committor function is a central object for quantifying the transitions between metastable states of dynamical systems. Recently, a number of computational methods based on deep neural networks have been developed for computing the high-dimensional committor function. The success of the methods relies on sampling adequate data for the transition, which still is a challenging task for complex systems at low temperatures. In this work, we propose a deep learning method with two novel adaptive sampling schemes (I and II). In the two schemes, the data are generated actively with a modified potential where the bias potential is constructed from the learned committor function. We theoretically demonstrate the advantages of the sampling schemes and show that the data in sampling scheme II are uniformly distributed along the transition tube. This makes a promising method for studying the transition of complex systems. The efficiency of the method is illustrated in high-dimensional systems including the alanine dipeptide and a solvated dimer system. |
| title | Deep Learning Method for Computing Committor Functions with Adaptive Sampling |
| topic | Computational Physics Machine Learning Numerical Analysis |
| url | https://arxiv.org/abs/2404.06206 |