DeeperHistReg: Robust Whole Slide Images Registration Framework
Fuente:
arXiv
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| Autores principales: | , , , |
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| Formato: | Preprint |
| Publicado: |
2024
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| Materias: | |
| Acceso en línea: | |
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| _version_ | 1866909177973047296 |
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| author | Wodzinski, Marek Marini, Niccolò Atzori, Manfredo Müller, Henning |
| author_facet | Wodzinski, Marek Marini, Niccolò Atzori, Manfredo Müller, Henning |
| contents | DeeperHistReg is a software framework dedicated to registering whole slide images (WSIs) acquired using multiple stains. It allows one to perform the preprocessing, initial alignment, and nonrigid registration of WSIs acquired using multiple stains (e.g. hematoxylin \& eosin, immunochemistry). The framework implements several state-of-the-art registration algorithms and provides an interface to operate on arbitrary resolution of the WSIs (up to 200k x 200k). The framework is extensible and new algorithms can be easily integrated by other researchers. The framework is available both as a PyPI package and as a Docker container. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2404_14434 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | DeeperHistReg: Robust Whole Slide Images Registration Framework Wodzinski, Marek Marini, Niccolò Atzori, Manfredo Müller, Henning Image and Video Processing Computer Vision and Pattern Recognition Quantitative Methods DeeperHistReg is a software framework dedicated to registering whole slide images (WSIs) acquired using multiple stains. It allows one to perform the preprocessing, initial alignment, and nonrigid registration of WSIs acquired using multiple stains (e.g. hematoxylin \& eosin, immunochemistry). The framework implements several state-of-the-art registration algorithms and provides an interface to operate on arbitrary resolution of the WSIs (up to 200k x 200k). The framework is extensible and new algorithms can be easily integrated by other researchers. The framework is available both as a PyPI package and as a Docker container. |
| title | DeeperHistReg: Robust Whole Slide Images Registration Framework |
| topic | Image and Video Processing Computer Vision and Pattern Recognition Quantitative Methods |
| url | https://arxiv.org/abs/2404.14434 |