Bayesian Federated Inference for Survival Models
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arXiv
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| Autori principali: | , , , , |
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| Natura: | Preprint |
| Pubblicazione: |
2024
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| _version_ | 1866913331217956864 |
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| author | Pazira, Hassan Massa, Emanuele Weijers, Jetty AM Coolen, Anthony CC Jonker, Marianne A |
| author_facet | Pazira, Hassan Massa, Emanuele Weijers, Jetty AM Coolen, Anthony CC Jonker, Marianne A |
| contents | In cancer research, overall survival and progression free survival are often analyzed with the Cox model. To estimate accurately the parameters in the model, sufficient data and, more importantly, sufficient events need to be observed. In practice, this is often a problem. Merging data sets from different medical centers may help, but this is not always possible due to strict privacy legislation and logistic difficulties. Recently, the Bayesian Federated Inference (BFI) strategy for generalized linear models was proposed. With this strategy the statistical analyses are performed in the local centers where the data were collected (or stored) and only the inference results are combined to a single estimated model; merging data is not necessary. The BFI methodology aims to compute from the separate inference results in the local centers what would have been obtained if the analysis had been based on the merged data sets. In this paper we generalize the BFI methodology as initially developed for generalized linear models to survival models. Simulation studies and real data analyses show excellent performance; i.e., the results obtained with the BFI methodology are very similar to the results obtained by analyzing the merged data. An R package for doing the analyses is available. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2404_17464 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Bayesian Federated Inference for Survival Models Pazira, Hassan Massa, Emanuele Weijers, Jetty AM Coolen, Anthony CC Jonker, Marianne A Methodology Computation Machine Learning In cancer research, overall survival and progression free survival are often analyzed with the Cox model. To estimate accurately the parameters in the model, sufficient data and, more importantly, sufficient events need to be observed. In practice, this is often a problem. Merging data sets from different medical centers may help, but this is not always possible due to strict privacy legislation and logistic difficulties. Recently, the Bayesian Federated Inference (BFI) strategy for generalized linear models was proposed. With this strategy the statistical analyses are performed in the local centers where the data were collected (or stored) and only the inference results are combined to a single estimated model; merging data is not necessary. The BFI methodology aims to compute from the separate inference results in the local centers what would have been obtained if the analysis had been based on the merged data sets. In this paper we generalize the BFI methodology as initially developed for generalized linear models to survival models. Simulation studies and real data analyses show excellent performance; i.e., the results obtained with the BFI methodology are very similar to the results obtained by analyzing the merged data. An R package for doing the analyses is available. |
| title | Bayesian Federated Inference for Survival Models |
| topic | Methodology Computation Machine Learning |
| url | https://arxiv.org/abs/2404.17464 |