Digital Twin Generators for Disease Modeling

Fuente: arXiv
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Autores principales: Alam, Nameyeh, Basilico, Jake, Bertolini, Daniele, Chetty, Satish Casie, D'Angelo, Heather, Douglas, Ryan, Fisher, Charles K., Fuller, Franklin, Gomes, Melissa, Gupta, Rishabh, Lang, Alex, Loukianov, Anton, Mak-McCully, Rachel, Murray, Cary, Pham, Hanalei, Qiao, Susanna, Ryapolova-Webb, Elena, Smith, Aaron, Theoharatos, Dimitri, Tolwani, Anil, Tramel, Eric W., Vidovszky, Anna, Viduya, Judy, Walsh, Jonathan R.
Formato: Preprint
Publicado: 2024
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author Alam, Nameyeh
Basilico, Jake
Bertolini, Daniele
Chetty, Satish Casie
D'Angelo, Heather
Douglas, Ryan
Fisher, Charles K.
Fuller, Franklin
Gomes, Melissa
Gupta, Rishabh
Lang, Alex
Loukianov, Anton
Mak-McCully, Rachel
Murray, Cary
Pham, Hanalei
Qiao, Susanna
Ryapolova-Webb, Elena
Smith, Aaron
Theoharatos, Dimitri
Tolwani, Anil
Tramel, Eric W.
Vidovszky, Anna
Viduya, Judy
Walsh, Jonathan R.
author_facet Alam, Nameyeh
Basilico, Jake
Bertolini, Daniele
Chetty, Satish Casie
D'Angelo, Heather
Douglas, Ryan
Fisher, Charles K.
Fuller, Franklin
Gomes, Melissa
Gupta, Rishabh
Lang, Alex
Loukianov, Anton
Mak-McCully, Rachel
Murray, Cary
Pham, Hanalei
Qiao, Susanna
Ryapolova-Webb, Elena
Smith, Aaron
Theoharatos, Dimitri
Tolwani, Anil
Tramel, Eric W.
Vidovszky, Anna
Viduya, Judy
Walsh, Jonathan R.
contents A patient's digital twin is a computational model that describes the evolution of their health over time. Digital twins have the potential to revolutionize medicine by enabling individual-level computer simulations of human health, which can be used to conduct more efficient clinical trials or to recommend personalized treatment options. Due to the overwhelming complexity of human biology, machine learning approaches that leverage large datasets of historical patients' longitudinal health records to generate patients' digital twins are more tractable than potential mechanistic models. In this manuscript, we describe a neural network architecture that can learn conditional generative models of clinical trajectories, which we call Digital Twin Generators (DTGs), that can create digital twins of individual patients. We show that the same neural network architecture can be trained to generate accurate digital twins for patients across 13 different indications simply by changing the training set and tuning hyperparameters. By introducing a general purpose architecture, we aim to unlock the ability to scale machine learning approaches to larger datasets and across more indications so that a digital twin could be created for any patient in the world.
format Preprint
id arxiv_https___arxiv_org_abs_2405_01488
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Digital Twin Generators for Disease Modeling
Alam, Nameyeh
Basilico, Jake
Bertolini, Daniele
Chetty, Satish Casie
D'Angelo, Heather
Douglas, Ryan
Fisher, Charles K.
Fuller, Franklin
Gomes, Melissa
Gupta, Rishabh
Lang, Alex
Loukianov, Anton
Mak-McCully, Rachel
Murray, Cary
Pham, Hanalei
Qiao, Susanna
Ryapolova-Webb, Elena
Smith, Aaron
Theoharatos, Dimitri
Tolwani, Anil
Tramel, Eric W.
Vidovszky, Anna
Viduya, Judy
Walsh, Jonathan R.
Machine Learning
A patient's digital twin is a computational model that describes the evolution of their health over time. Digital twins have the potential to revolutionize medicine by enabling individual-level computer simulations of human health, which can be used to conduct more efficient clinical trials or to recommend personalized treatment options. Due to the overwhelming complexity of human biology, machine learning approaches that leverage large datasets of historical patients' longitudinal health records to generate patients' digital twins are more tractable than potential mechanistic models. In this manuscript, we describe a neural network architecture that can learn conditional generative models of clinical trajectories, which we call Digital Twin Generators (DTGs), that can create digital twins of individual patients. We show that the same neural network architecture can be trained to generate accurate digital twins for patients across 13 different indications simply by changing the training set and tuning hyperparameters. By introducing a general purpose architecture, we aim to unlock the ability to scale machine learning approaches to larger datasets and across more indications so that a digital twin could be created for any patient in the world.
title Digital Twin Generators for Disease Modeling
topic Machine Learning
url https://arxiv.org/abs/2405.01488