MedConceptsQA: Open Source Medical Concepts QA Benchmark

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Hauptverfasser: Shoham, Ofir Ben, Rappoport, Nadav
Format: Preprint
Veröffentlicht: 2024
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author Shoham, Ofir Ben
Rappoport, Nadav
author_facet Shoham, Ofir Ben
Rappoport, Nadav
contents We present MedConceptsQA, a dedicated open source benchmark for medical concepts question answering. The benchmark comprises of questions of various medical concepts across different vocabularies: diagnoses, procedures, and drugs. The questions are categorized into three levels of difficulty: easy, medium, and hard. We conducted evaluations of the benchmark using various Large Language Models. Our findings show that pre-trained clinical Large Language Models achieved accuracy levels close to random guessing on this benchmark, despite being pre-trained on medical data. However, GPT-4 achieves an absolute average improvement of nearly 27%-37% (27% for zero-shot learning and 37% for few-shot learning) when compared to clinical Large Language Models. Our benchmark serves as a valuable resource for evaluating the understanding and reasoning of medical concepts by Large Language Models. Our benchmark is available at https://huggingface.co/datasets/ofir408/MedConceptsQA
format Preprint
id arxiv_https___arxiv_org_abs_2405_07348
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle MedConceptsQA: Open Source Medical Concepts QA Benchmark
Shoham, Ofir Ben
Rappoport, Nadav
Computation and Language
Machine Learning
We present MedConceptsQA, a dedicated open source benchmark for medical concepts question answering. The benchmark comprises of questions of various medical concepts across different vocabularies: diagnoses, procedures, and drugs. The questions are categorized into three levels of difficulty: easy, medium, and hard. We conducted evaluations of the benchmark using various Large Language Models. Our findings show that pre-trained clinical Large Language Models achieved accuracy levels close to random guessing on this benchmark, despite being pre-trained on medical data. However, GPT-4 achieves an absolute average improvement of nearly 27%-37% (27% for zero-shot learning and 37% for few-shot learning) when compared to clinical Large Language Models. Our benchmark serves as a valuable resource for evaluating the understanding and reasoning of medical concepts by Large Language Models. Our benchmark is available at https://huggingface.co/datasets/ofir408/MedConceptsQA
title MedConceptsQA: Open Source Medical Concepts QA Benchmark
topic Computation and Language
Machine Learning
url https://arxiv.org/abs/2405.07348