Scale-adaptive and robust intrinsic dimension estimation via optimal neighbourhood identification

Fuente: arXiv
Saved in:
Bibliographic Details
Main Authors: Di Noia, Antonio, Macocco, Iuri, Glielmo, Aldo, Laio, Alessandro, Mira, Antonietta
Format: Preprint
Published: 2024
Subjects:
Online Access:
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1866915904519929856
author Di Noia, Antonio
Macocco, Iuri
Glielmo, Aldo
Laio, Alessandro
Mira, Antonietta
author_facet Di Noia, Antonio
Macocco, Iuri
Glielmo, Aldo
Laio, Alessandro
Mira, Antonietta
contents The Intrinsic Dimension (ID) is a key concept in unsupervised learning and feature selection, as it is a lower bound to the number of variables which are necessary to describe a system. However, in almost any real-world dataset the ID depends on the scale at which the data are analysed. Quite typically at a small scale, the ID is very large, as the data are affected by measurement errors. At large scale, the ID can also appear erroneously large, due to the curvature and the topology of the manifold containing the data. In this work, we introduce an automatic protocol to select the sweet spot, namely the correct range of scales in which the ID is meaningful and useful. This protocol is based on imposing that for distances smaller than the correct scale the density of the data is constant. In the presented framework, to estimate the density it is necessary to know the ID, therefore, this condition is imposed self-consistently. We illustrate the usefulness and robustness of this procedure to noise by benchmarks on artificial and real-world datasets.
format Preprint
id arxiv_https___arxiv_org_abs_2405_15132
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Scale-adaptive and robust intrinsic dimension estimation via optimal neighbourhood identification
Di Noia, Antonio
Macocco, Iuri
Glielmo, Aldo
Laio, Alessandro
Mira, Antonietta
Machine Learning
Statistics Theory
Computation
Methodology
The Intrinsic Dimension (ID) is a key concept in unsupervised learning and feature selection, as it is a lower bound to the number of variables which are necessary to describe a system. However, in almost any real-world dataset the ID depends on the scale at which the data are analysed. Quite typically at a small scale, the ID is very large, as the data are affected by measurement errors. At large scale, the ID can also appear erroneously large, due to the curvature and the topology of the manifold containing the data. In this work, we introduce an automatic protocol to select the sweet spot, namely the correct range of scales in which the ID is meaningful and useful. This protocol is based on imposing that for distances smaller than the correct scale the density of the data is constant. In the presented framework, to estimate the density it is necessary to know the ID, therefore, this condition is imposed self-consistently. We illustrate the usefulness and robustness of this procedure to noise by benchmarks on artificial and real-world datasets.
title Scale-adaptive and robust intrinsic dimension estimation via optimal neighbourhood identification
topic Machine Learning
Statistics Theory
Computation
Methodology
url https://arxiv.org/abs/2405.15132