GCtx-UNet: Efficient Network for Medical Image Segmentation
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arXiv
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| Auteurs principaux: | , |
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| Format: | Preprint |
| Publié: |
2024
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| _version_ | 1866917689174261760 |
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| author | Alrfou, Khaled Zhao, Tian |
| author_facet | Alrfou, Khaled Zhao, Tian |
| contents | Medical image segmentation is crucial for disease diagnosis and monitoring. Though effective, the current segmentation networks such as UNet struggle with capturing long-range features. More accurate models such as TransUNet, Swin-UNet, and CS-UNet have higher computation complexity. To address this problem, we propose GCtx-UNet, a lightweight segmentation architecture that can capture global and local image features with accuracy better or comparable to the state-of-the-art approaches. GCtx-UNet uses vision transformer that leverages global context self-attention modules joined with local self-attention to model long and short range spatial dependencies. GCtx-UNet is evaluated on the Synapse multi-organ abdominal CT dataset, the ACDC cardiac MRI dataset, and several polyp segmentation datasets. In terms of Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD) metrics, GCtx-UNet outperformed CNN-based and Transformer-based approaches, with notable gains in the segmentation of complex and small anatomical structures. Moreover, GCtx-UNet is much more efficient than the state-of-the-art approaches with smaller model size, lower computation workload, and faster training and inference speed, making it a practical choice for clinical applications. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2406_05891 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | GCtx-UNet: Efficient Network for Medical Image Segmentation Alrfou, Khaled Zhao, Tian Image and Video Processing Computer Vision and Pattern Recognition Machine Learning Medical image segmentation is crucial for disease diagnosis and monitoring. Though effective, the current segmentation networks such as UNet struggle with capturing long-range features. More accurate models such as TransUNet, Swin-UNet, and CS-UNet have higher computation complexity. To address this problem, we propose GCtx-UNet, a lightweight segmentation architecture that can capture global and local image features with accuracy better or comparable to the state-of-the-art approaches. GCtx-UNet uses vision transformer that leverages global context self-attention modules joined with local self-attention to model long and short range spatial dependencies. GCtx-UNet is evaluated on the Synapse multi-organ abdominal CT dataset, the ACDC cardiac MRI dataset, and several polyp segmentation datasets. In terms of Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD) metrics, GCtx-UNet outperformed CNN-based and Transformer-based approaches, with notable gains in the segmentation of complex and small anatomical structures. Moreover, GCtx-UNet is much more efficient than the state-of-the-art approaches with smaller model size, lower computation workload, and faster training and inference speed, making it a practical choice for clinical applications. |
| title | GCtx-UNet: Efficient Network for Medical Image Segmentation |
| topic | Image and Video Processing Computer Vision and Pattern Recognition Machine Learning |
| url | https://arxiv.org/abs/2406.05891 |