Computing the Frequency Response of Biochemical Networks: A Python module
Fuente:
arXiv
Guardado en:
| Autor principal: | Sauro, Herbert M |
|---|---|
| Formato: | Preprint |
| Publicado: |
2024
|
| Materias: | |
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
A Simple Comparison of Biochemical Systems Theory and Metabolic Control Analysis
por: Sauro, Herbert M
Publicado: (2024)
por: Sauro, Herbert M
Publicado: (2024)
An Update to the SBML Human-Readable Antimony Language
por: Smith, Lucian, et al.
Publicado: (2024)
por: Smith, Lucian, et al.
Publicado: (2024)
SBcoyote: An Extensible Python-Based Reaction Editor and Viewer
por: Xu, Jin, et al.
Publicado: (2023)
por: Xu, Jin, et al.
Publicado: (2023)
GRiNS: A Python Library for Simulating Gene Regulatory Network Dynamics
por: Harlapur, Pradyumna, et al.
Publicado: (2025)
por: Harlapur, Pradyumna, et al.
Publicado: (2025)
CANA v1.0.0 and schematodes: efficient quantification of symmetry in Boolean automata
por: Marcus, Austin M., et al.
Publicado: (2024)
por: Marcus, Austin M., et al.
Publicado: (2024)
Modularity Emerges from Action-Functional Constraints in Marine Metabolic Networks: A Biology-Scale Validation of the Network-Weighted Action Principle
por: Frasch, Martin G.
Publicado: (2026)
por: Frasch, Martin G.
Publicado: (2026)
BioCode: A Data-Driven Procedure to Learn the Growth of Biological Networks
por: Sefer, Emre
Publicado: (2021)
por: Sefer, Emre
Publicado: (2021)
Markovian Promoter Models: A Mechanistic Alternative to Hill Functions in Gene Regulatory Networks
por: Wu, Tianyu
Publicado: (2025)
por: Wu, Tianyu
Publicado: (2025)
Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry
por: Kaushal, Prashant, et al.
Publicado: (2024)
por: Kaushal, Prashant, et al.
Publicado: (2024)
KINDLE: Knowledge-Guided Distillation for Prior-Free Gene Regulatory Network Inference
por: Peng, Rui, et al.
Publicado: (2025)
por: Peng, Rui, et al.
Publicado: (2025)
Meta-analysis and Topological Perturbation in Interactomic Network for Anti-opioid Addiction Drug Repurposing
por: Zhang, Chunhuan, et al.
Publicado: (2025)
por: Zhang, Chunhuan, et al.
Publicado: (2025)
FluxGAT: Integrating Flux Sampling with Graph Neural Networks for Unbiased Gene Essentiality Classification
por: Sharma, Kieren, et al.
Publicado: (2024)
por: Sharma, Kieren, et al.
Publicado: (2024)
A Sensitivity Analysis Methodology for Rule-Based Stochastic Chemical Systems
por: Machado, Erika M. Herrera, et al.
Publicado: (2025)
por: Machado, Erika M. Herrera, et al.
Publicado: (2025)
A compact model of Escherichia coli core and biosynthetic metabolism
por: Corrao, Marco, et al.
Publicado: (2024)
por: Corrao, Marco, et al.
Publicado: (2024)
Practical indistinguishability in a gene regulatory network inference problem, a case study
por: FitzGerald, Cody E., et al.
Publicado: (2025)
por: FitzGerald, Cody E., et al.
Publicado: (2025)
Hierarchical Preemption: A Novel Information-Theoretic Control Mechanism in Lambda Phage Decision-Making
por: Simao, Eugenio
Publicado: (2025)
por: Simao, Eugenio
Publicado: (2025)
Resource competition in Three-gene-motif & Emergence of Feed-forward response: A Spatiotemporal Study
por: Chakraborty, Priya, et al.
Publicado: (2022)
por: Chakraborty, Priya, et al.
Publicado: (2022)
Transcriptome and Redox Proteome Reveal Temporal Scales of Carbon Metabolism Regulation in Model Cyanobacteria Under Light Disturbance
por: Johnson, Connah G. M., et al.
Publicado: (2024)
por: Johnson, Connah G. M., et al.
Publicado: (2024)
drGT: Attention-Guided Gene Assessment of Drug Response Utilizing a Drug-Cell-Gene Heterogeneous Network
por: Inoue, Yoshitaka, et al.
Publicado: (2024)
por: Inoue, Yoshitaka, et al.
Publicado: (2024)
The evolution of systems biology and systems medicine: From mechanistic models to uncertainty quantification
por: Qiao, Lingxia, et al.
Publicado: (2024)
por: Qiao, Lingxia, et al.
Publicado: (2024)
RatGene: Gene deletion-addition algorithms using growth to production ratio for growth-coupled production in constraint-based metabolic networks
por: Ma, Yier, et al.
Publicado: (2024)
por: Ma, Yier, et al.
Publicado: (2024)
Modelling and calibration of pair-rule protein patterns in Drosophila embryo: From Even-skipped and Fushi-tarazu to Wingless expression networks
por: Dias, Catarina, et al.
Publicado: (2024)
por: Dias, Catarina, et al.
Publicado: (2024)
Quantifying energy landscape of high-dimensional oscillatory systems by diffusion decomposition
por: Bian, Shirui, et al.
Publicado: (2024)
por: Bian, Shirui, et al.
Publicado: (2024)
Spatial modeling algorithms for reactions and transport (SMART) in biological cells
por: Francis, Emmet A., et al.
Publicado: (2024)
por: Francis, Emmet A., et al.
Publicado: (2024)
Quantitative Aspects, Engineering and Optimization of Bacterial Sensor Systems
por: Anderl, Florian, et al.
Publicado: (2024)
por: Anderl, Florian, et al.
Publicado: (2024)
Graph Identification of Proteins in Tomograms (GRIP-Tomo) 2.0: Topologically Aware Classification for Proteins
por: Li, Chengxuan, et al.
Publicado: (2025)
por: Li, Chengxuan, et al.
Publicado: (2025)
Weak Independence and Coupled Parallelism in Biological Petri Nets
por: Simao, Eugenio
Publicado: (2025)
por: Simao, Eugenio
Publicado: (2025)
Systems-Level Analysis of Multisite Protein Phosphorylation: Mathematical Induction, Geometric Series, and Entropy
por: Tavassoly, Iman, et al.
Publicado: (2025)
por: Tavassoly, Iman, et al.
Publicado: (2025)
Prediction of source nutrients for microorganisms using metabolic networks
por: Bulka, Olivia, et al.
Publicado: (2026)
por: Bulka, Olivia, et al.
Publicado: (2026)
Negative feedback and oscillations in a model for mRNA translation
por: Ehrman, Aliza, et al.
Publicado: (2025)
por: Ehrman, Aliza, et al.
Publicado: (2025)
Inferring gene regulation dynamics from static snapshots of gene expression variability
por: Joly-Smith, Euan, et al.
Publicado: (2021)
por: Joly-Smith, Euan, et al.
Publicado: (2021)
Sampling from the Solution Space and Metabolic Environments of Genome-Scale Metabolic Models
por: Zafeiropoulos, Haris, et al.
Publicado: (2026)
por: Zafeiropoulos, Haris, et al.
Publicado: (2026)
A CRISP approach to QSP: XAI enabling fit-for-purpose models
por: DeTal, Noah, et al.
Publicado: (2025)
por: DeTal, Noah, et al.
Publicado: (2025)
On Quantum Random Walks in Biomolecular Networks
por: Dubovitskii, Viacheslav, et al.
Publicado: (2025)
por: Dubovitskii, Viacheslav, et al.
Publicado: (2025)
A network-driven framework for enhancing gene-disease association studies in coronary artery disease
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2025)
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2025)
STL-based Optimization of Biomolecular Neural Networks for Regression and Control
por: Palanques-Tost, Eric, et al.
Publicado: (2025)
por: Palanques-Tost, Eric, et al.
Publicado: (2025)
Gene Regulatory Network Inference in the Presence of Dropouts: a Causal View
por: Dai, Haoyue, et al.
Publicado: (2024)
por: Dai, Haoyue, et al.
Publicado: (2024)
Predicting the genetic component of gene expression using gene regulatory networks
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2024)
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2024)
Simultaneously Infer Cell Pseudotime,Velocity Field and Gene Interaction from Multi-Branch scRNA-seq Data with scPN
por: Zhou, Zhen, et al.
Publicado: (2024)
por: Zhou, Zhen, et al.
Publicado: (2024)
Single-Cell Proteomic Technologies: Tools in the quest for principles
por: Slavov, Nikolai
Publicado: (2025)
por: Slavov, Nikolai
Publicado: (2025)
Ejemplares similares
-
A Simple Comparison of Biochemical Systems Theory and Metabolic Control Analysis
por: Sauro, Herbert M
Publicado: (2024) -
An Update to the SBML Human-Readable Antimony Language
por: Smith, Lucian, et al.
Publicado: (2024) -
SBcoyote: An Extensible Python-Based Reaction Editor and Viewer
por: Xu, Jin, et al.
Publicado: (2023) -
GRiNS: A Python Library for Simulating Gene Regulatory Network Dynamics
por: Harlapur, Pradyumna, et al.
Publicado: (2025) -
CANA v1.0.0 and schematodes: efficient quantification of symmetry in Boolean automata
por: Marcus, Austin M., et al.
Publicado: (2024)