On Unique Error Patterns in the Levenshtein's Sequence Reconstruction Model

Fuente: arXiv
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Autores principales: Junnila, Ville, Laihonen, Tero, Lehtilä, Tuomo
Formato: Preprint
Publicado: 2024
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author Junnila, Ville
Laihonen, Tero
Lehtilä, Tuomo
author_facet Junnila, Ville
Laihonen, Tero
Lehtilä, Tuomo
contents In the Levenshtein's sequence reconstruction problem a codeword is transmitted through $N$ channels and in each channel a set of errors is introduced to the transmitted word. In previous works, the restriction that each channel provides a unique output word has been essential. In this work, we assume only that each channel introduces a unique set of errors to the transmitted word and hence some output words can also be identical. As we will discuss, this interpretation is both natural and useful for deletion and insertion errors. We give properties, techniques and (optimal) results for this situation. Quaternary alphabets are relevant due to applications related to DNA-memories. Hence, we introduce an efficient Las Vegas style decoding algorithm for simultaneous insertion, deletion and substitution errors in $q$-ary Hamming spaces for $q \geq 4$.
format Preprint
id arxiv_https___arxiv_org_abs_2406_14125
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle On Unique Error Patterns in the Levenshtein's Sequence Reconstruction Model
Junnila, Ville
Laihonen, Tero
Lehtilä, Tuomo
Information Theory
68P20, 68P30, 94B35
In the Levenshtein's sequence reconstruction problem a codeword is transmitted through $N$ channels and in each channel a set of errors is introduced to the transmitted word. In previous works, the restriction that each channel provides a unique output word has been essential. In this work, we assume only that each channel introduces a unique set of errors to the transmitted word and hence some output words can also be identical. As we will discuss, this interpretation is both natural and useful for deletion and insertion errors. We give properties, techniques and (optimal) results for this situation. Quaternary alphabets are relevant due to applications related to DNA-memories. Hence, we introduce an efficient Las Vegas style decoding algorithm for simultaneous insertion, deletion and substitution errors in $q$-ary Hamming spaces for $q \geq 4$.
title On Unique Error Patterns in the Levenshtein's Sequence Reconstruction Model
topic Information Theory
68P20, 68P30, 94B35
url https://arxiv.org/abs/2406.14125