CholecInstanceSeg: A Tool Instance Segmentation Dataset for Laparoscopic Surgery

Fuente: arXiv
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Main Authors: Alabi, Oluwatosin, Toe, Ko Ko Zayar, Zhou, Zijian, Budd, Charlie, Raison, Nicholas, Shi, Miaojing, Vercauteren, Tom
Format: Preprint
Published: 2024
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author Alabi, Oluwatosin
Toe, Ko Ko Zayar
Zhou, Zijian
Budd, Charlie
Raison, Nicholas
Shi, Miaojing
Vercauteren, Tom
author_facet Alabi, Oluwatosin
Toe, Ko Ko Zayar
Zhou, Zijian
Budd, Charlie
Raison, Nicholas
Shi, Miaojing
Vercauteren, Tom
contents In laparoscopic and robotic surgery, precise tool instance segmentation is an essential technology for advanced computer-assisted interventions. Although publicly available procedures of routine surgeries exist, they often lack comprehensive annotations for tool instance segmentation. Additionally, the majority of standard datasets for tool segmentation are derived from porcine(pig) surgeries. To address this gap, we introduce CholecInstanceSeg, the largest open-access tool instance segmentation dataset to date. Derived from the existing CholecT50 and Cholec80 datasets, CholecInstanceSeg provides novel annotations for laparoscopic cholecystectomy procedures in patients. Our dataset comprises 41.9k annotated frames extracted from 85 clinical procedures and 64.4k tool instances, each labelled with semantic masks and instance IDs. To ensure the reliability of our annotations, we perform extensive quality control, conduct label agreement statistics, and benchmark the segmentation results with various instance segmentation baselines. CholecInstanceSeg aims to advance the field by offering a comprehensive and high-quality open-access dataset for the development and evaluation of tool instance segmentation algorithms.
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id arxiv_https___arxiv_org_abs_2406_16039
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publishDate 2024
record_format arxiv
spellingShingle CholecInstanceSeg: A Tool Instance Segmentation Dataset for Laparoscopic Surgery
Alabi, Oluwatosin
Toe, Ko Ko Zayar
Zhou, Zijian
Budd, Charlie
Raison, Nicholas
Shi, Miaojing
Vercauteren, Tom
Computer Vision and Pattern Recognition
In laparoscopic and robotic surgery, precise tool instance segmentation is an essential technology for advanced computer-assisted interventions. Although publicly available procedures of routine surgeries exist, they often lack comprehensive annotations for tool instance segmentation. Additionally, the majority of standard datasets for tool segmentation are derived from porcine(pig) surgeries. To address this gap, we introduce CholecInstanceSeg, the largest open-access tool instance segmentation dataset to date. Derived from the existing CholecT50 and Cholec80 datasets, CholecInstanceSeg provides novel annotations for laparoscopic cholecystectomy procedures in patients. Our dataset comprises 41.9k annotated frames extracted from 85 clinical procedures and 64.4k tool instances, each labelled with semantic masks and instance IDs. To ensure the reliability of our annotations, we perform extensive quality control, conduct label agreement statistics, and benchmark the segmentation results with various instance segmentation baselines. CholecInstanceSeg aims to advance the field by offering a comprehensive and high-quality open-access dataset for the development and evaluation of tool instance segmentation algorithms.
title CholecInstanceSeg: A Tool Instance Segmentation Dataset for Laparoscopic Surgery
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2406.16039